Results for "software"
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Comment on "Short-read assembly using Spades !"
...he process of constructing a genome sequence from a large number of short sequencing reads. SPAdes (St. Petersburg genome assembler) is a popular software tool for short-read assembly....405 days ago
Comment on "Short-read assembly using Spades !"
...verview of how to use SPAdes for short-read assembly: Install SPAdes: SPAdes can be downloaded from the official website (http://cab.spbu.ru/software/spades/). It is available for...410 days ago
Comment on "Tools to detect synteny blocks regions among multiple genomes"
...f the selected species from a public database, such as NCBI or Ensembl. Gene annotation: Annotate the genes in each genome using gene prediction software or tools such as MAKER. Iden...413 days ago
Comment on "Download desire version of Blast software !"
Latest blast software and old versions https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/932 days ago
Comment on "Coronavirus Resources !"
Illumina toolkit for SARS-CoV2 https://sapac.illumina.com/informatics/biological-interpretation/coronavirus-software.html#about951 days ago
- Usage Summary Produce help page. Quickly check the software usage and available command line options. $ ./fastANI -h One to One. Compute ANI between single query...
1091 days ago
Comment on "List of non-commercial NGS genotype-calling software"
...variant and indel caller for mapped sequencing data. [ paper-2015 ]gridss – GRIDSS: the Genomic Rearrangement IDentification Software Suite. [ paper-2017 ...1132 days ago
Comment on "Sibelia: A comparative genomics tool"
...synteny blocks with a colorful circular diagram by using the "Circos" software [3]. Files for generating suc...te "Circos" diagram do following: 1. Download and install "Circos" software 2. Run "Sibelia" 3. Run "Ci...1275 days ago
Comment on "REAPR: a universal tool for genome assembly evaluation"
Reapr is a tool trying to find explicit errors in the assembly based on incongruently mapped reads. It is heavily based on too low span coverage, or reads mapping t...1327 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics tools are published by this journal f1000research https://f1000research.com/for-authors/article-guidelines/software-tool-articles1430 days ago
