Results for "split reads"

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  • Bioinformatics approach to Boar Taint

    Meat products obtained from intact male pigs often produce offensive smell or odour w...taint levels were done in Illumina HiSeq2000 to >10X average coverage. Short reads generated from these samples...

    3752 days ago

  • Download blasr 1.3 version

    ...ng "OPERA-LG_v2.0.5/bin/preprocess_reads.pl" and have the following er...Finding the SA coordinates of the reads using BWA aln...[Thu Jun 14 1...FALCON-Unzip-Scaff.bamMapping long-reads using blasr.../home/urbe/Tool...c 40 -m 1 -minMatch 5 -bestn 10 -noSplitSubreads -advanceExactMatches...

    2114 days ago

  • Evaluation of genome assembly software based on long reads

    TGS technologies have been used to produce highly accurate de novo ass...DBG2OLC, Spades and Cerulean. The first 8 software use only long reads, while the 3 last software can merge long and short reads

    1882 days ago

  • Spades tutorial PDF

    SPAdes—St. Petersburg genome Assembler—was originally developed for de no...ble assembly of IonTorrent data, as well as hybrid assembly from short and long reads (PacBio and Oxford Nanopore)....

    786 days ago