Results for "tool"
Top-level pages
...h, development, or application of computational tools and approaches for expanding...; and (3) the development and implementation of tools that enable efficient access...e the computer has become an essential research tool. Three key areas are the org...3932 days ago
- ...from large databases. Data mining is becoming an increasingly important tool to transform this data into i...orations/issue4-2/zaki.pdf Bioinformatics and Medical Informatics: Tools for Mining and Applying Gene...
3931 days ago
- ...n during various conditions. The most important tools here are microarrays and bio...mparative Genomics Tutorial: GENOME TUTORIAL: Tools and resources for identifyin.... Sequin Sequin is a stand-alone software tool developed by the NCBI for sub...
3927 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...ement, and alignment software tools The Sequence Alignment/Map format and SAMtools. Li et al, Bioinformatics 25...ed FastQC: a quality control tool for high-throughput sequence...ed with a variety of software tools installed and ready to use....3764 days ago
List of bioinformatics open source projects/software.
...y-foundation-evolves-into-new-toolkit-net-bio.aspx A language-neutral bioinformatics toolkit built using the Microsoft...rogramming language) language toolkit Bioinformatics Learning T...al Dipolar Coupling data SAM Tools Data format (SAM) and accom...3741 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...CDPOP is a landscape genetics tool for simulating the emergence...goryid=3283CoaSim CoaSim is a tool for simulating the coalescent...imulation Program. A software tool for testing and investigating...unt.sourceforge.net/MetaSim A tool to generate collections of sy...3722 days ago
List of In-silico Binding Site Prediction Tools
...mely fast and powerful search tool that facilitates exploration...rch. Currently it is the only tool that offers this kind of inte...ftware is available, as a web tool, free of charge for academic...gi-bin/screen2.cgi is a tool for identifying protein cavit...3729 days ago
Next generation sequencing in R or bioconductor environment
...like GenomicRanges, ShortRead, Rsamtools, etc. Documentation Gen...packages including ShortRead, Rsamtools, rtracklayer, GenomicFeature...Illumina reads. Documentation Rsamtools Rsamtools provides function...gnment data in BAM format (via Rsamtools) and associating them with g...3609 days ago
Commercial and public next-gen-seq (NGS) software
...visualization and statistics tool from SAS. They are working with NCGR to refine this tool and produce others. NextGENe...Vmatch - A versatile software tool for efficiently solving large...MapNext - MapNext: A software tool for spliced and unspliced ali...3503 days ago
- ...riptional and post-transcription levels. Here are some important DBs and tools related with miRNA: miRNA Sequencing data analysis : http://tools.genxpro.net/omiras/ miRNApa...
3481 days ago
