DAVI: Deep learning-based tool for alignment and single nucleotide variant identification
DAVI consists of models for both global and local alignment and for variant calling. We have evaluated the performance of DAVI against existing state-of-the-art tool sets and found that i...1136 days ago
Next Generation Sequencing (NGS) Tutorials
...a pipeline for read cleaning, mapping and SNP calling using Next Generation Sequenc...aining-activities-schedule/archive-2013.html Variant Detection (Model organism) Ad...1CuKkKylVDb03tnN7RSWl5EUzleetn0ctjmvaidPKLxM Variant Detection Introductory tutori...3477 days ago
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7th International Conference on Bioinformatics and Computational Biology (BICoB)
In recent years, computational biology and medical informatics have seen significant a...ation analysis, population simulation, haplotyping, marker discovery, genotype calling. Systems biology: S...3488 days ago
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Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All ge...uence, and determined genotypes on a single-sample basis to avoid preferential calling of genotypes from populations...1082 days ago
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MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a...insertions and deletions. To support the growing interest in larger structural variant...2896 days ago