Results for "variation"
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Next Generation Sequencing (NGS) Tutorials
...==== NGS data analysis pipelines Detecting and annotating genetic variations using the HugeSeq pipeline&n...eration Sequence 10.1186/1471-2164-12-285 A framework for variation discovery and genotyping usin...3471 days ago
Junk part of the human genome unlocked
...s researchers originally had believed " Simple Quantitative PCR Approach to Reveal Naturally Occurring and Mutation-Induced Repetitive Sequence Variation on the Drosophila Y Chromosom...3479 days ago
- Explore genetic variation interactively. Compare entire cohorts in seconds with SQL-like queries. Compute transition/transversion ratios, genome-wide association, allelic freq...
3409 days ago
Resolving the complexity of the human genome using single-molecule sequencing
...t more than 160 euchromatic gaps remain and aspects of its structural variation remain poorly understood ten...rence suggest a greater complexity of the human genome in the form of variation of longer and more complex re...3204 days ago
- Pilon is a software tool which can be used to: Automatically improve draft assemblies Find variation among strains, including large event detection Pilon requires as input a FAS...
2992 days ago
- ...e Biology Group at the Broad Institute. It provides basic data structures for efficient data manipulation (mostly genomic sequences, alignments, variation etc.), as well as specialized...
2992 days ago
mrFAST: Micro Read Fast Alignment Search Tool
mrFAST is a read mapper that is designed to map short reads to reference genome with a special emphasis on the discovery of structural variation and segmental duplications. mrFAST maps...2915 days ago
Hagfish - assess an assembly through creative use of coverage plots
...pt of coverage plots and aims to assist (amongst others) in quality control of de novo genome assembly or identification of structural variation in a genome re-sequencing exp...2890 days ago
- ...orkflows, including those for genomic resequencing, RNA-Seq and Chip-seq. Stampy excels in the mapping of reads containing that contain sequence variation relative to the reference, in...
2890 days ago
- ...the diversity of histone proteins and their sequence variants in many organisms. The resource was established to better understand how sequence variation may affect functional and str...
2877 days ago
