Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...mposition-based approach and non-negative least squares for prediction) Web service Software (Python) ht...ng taxonomy to sequencing reads from clinical and environmental samples Web service http://taxonomer.iob...2361 days ago
2340 days ago
Tools for bacterial whole genome annotation
RAST – Web tool (upload contigs), uses the subsystems in the SEED database and p...se. MAKER is available for download and can be tested online via the MAKER Web Annotation Service (MWAS). M...2321 days ago
Bioinformatics Web Application Development with Perl
...the growth of the world wide web. Dynamic web pages—the precursor to...that represented seem clunky. Web pages have become web applica...) nor the only mechanisms for web programming with Perl (see Me...ies In the early days of the web, deploying a Perl web applica...2311 days ago
List of visualization tools for network biology
...tion and network management http://sbi.imim.es/web/BIANA.php BioLayout Express...rt external data http://tinyurl.com/yEdGraph/ Web tools for network analysis A...dense graphs http://tinyurl.com/graphle/ GraphWeb Web server for graph-b...2278 days ago
List of visualization tools for genome alignments
...oftware/artemis/ DNannotator Annotation web toolkit for regional genomic...SGWID=0-0-45-1487072-p176815501 LookSeq Web-based visualization of sequen...w.sourceforge.net/projects/sewal STAR A web-based integrated solution to...2273 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...you can read, write, and execute - good for scripts chmod 644 file — you can read and write, and everyone else can only read - good for web pages chmod 755 file &md...2270 days ago
Python learning resources for bioinformatics and computational biologist !
...s. Professionally, Python is great for backend web development, data analysis, a...e (2.6 - 2.x & 3.1 - 3.x) Test-Driven Web Development with Python ...sp;- Allen B. Downey (2nd Edition) (PDF, HTML) Web2py: Complete Reference Manual...2245 days ago
Some useful Bioinformatics links
...//madsalbertsen.github.io/multi-metagenome/docs/step9.html Bandage by rrwick https://rrwick.github.io/Bandage/ Codon Optimization OnLine (COOL): a web-based multi-objective optimiz...2231 days ago
Protein-Protein Interaction Sites Predictions !
...otein-protein interaction sites. meta-PPISP is built on three individual web servers: cons-PPISP,&nbs...empirical scoring function Other Sites (DNA, RNA, Metals) CHED Web server for predicting soft me...2192 days ago