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Results for "wgs-assembler"

Bio-Scripts

• • Jit@jit.aber

  

  Resume the MIRA assembler run !

  mira -r manifest_file Usage: mira [options] manifest_file [manifest_file ...] Options: -c / --cwd= directory Change working directory -r / --r...

  1724 days ago

• • Jit@jit.aber

  

  Downloading GATK !

  jitendra@jitendra-UNLOCK-INSTALL[SNP] wget https://github.com/broadinstitute/gatk/releases/download/4.0.2.1/gatk-4.0.2.1.zip --2018-08-30 11:47:20-- https://github.com/b...

  2065 days ago

• • Jit@jit.aber

  

  Installing Platypus on Ubuntu !

  (py27) ➜ Tools git:(master) ✗ git clone https://github.com/andyrimmer/Platypus.git Cloning into 'Platypus'... remote: Enumerating objects: 1394, do...

  2009 days ago

• • Jit@jit.aber

  

  Pack a perl program with their dependencies on Ubuntu !

  #Follow steps to create your own executable ./web jit@jit-HP-Pro-3335-MT:~/Downloads/autoConTAMPR/bin$ sudo apt install libpar-packer-perl Reading package lists... Don...

  1501 days ago

• • Neelam Jha@neelam

  

  Install Ragout genome assembler

  $ conda install -c bioconda ragout Collecting package metadata (repodata.json): done Solving environment: done ## Package Plan ## environment location: /home/ana...

  1454 days ago

• • Jit@jit.aber

  

  Install Bwise using conda !

  (JitMetaENV) ➜ test_phase_assebly conda install -c bioconda bwise Collecting package metadata (current_repodata.json): done Solving environment: done ## Package Plan...

  979 days ago

• • LEGE@lege

  

  Tadpole is 250x faster than SPADes assembler !

  lege@jit-Lenovo-ideapad-320-15ISK:~/Downloads/MyTools/Vir$ tadpole.sh Written by Brian Bushnell Last modified July 16, 2018 Description: Uses kmer counts to assem...

  966 days ago