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Transpose the file coordinates and plot dendrogram in R

#Save this as tr.awk { for (i=1; i<=NF; i++) a[NR,i]=$i } END { for (i=1; i<=NF; i++) { for (j=1; j<=NR; j++) { printf "%s", a[j,i] if (j<NR) printf "%s", OFS } printf "%s",ORS } } #Run this on command-line to transpose ur file awk -f tr.awk bbb.txt > bbbout.txt #Plot in R tetra <- read.csv("bbbout.txt", header=T, stringsAsFactors = F, sep = "\t", row.names = 1) hc = hclust(dist(tetra)) plot (hc)