Extract fasta sequence with Ids with Bash script
By Archana Malhotra 2343 days ago
#!/bin/bash
while IFS='' read -r line || [[ -n "$line" ]]; do
echo "Text read from file: $line"
samtools faidx ONT.fasta $line > $line.faa
done < "$1"
#!/bin/bash
while IFS='' read -r line || [[ -n "$line" ]]; do
echo "Text read from file: $line"
samtools faidx ONT.fasta $line > $line.faa
done < "$1"