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The Wire
#Filter
Wire posts tagged with 'Filter'
Jit
@jit.aber
Thread
By
Jit
2120 days ago
reformat.sh in=reads.fq out=highQuality.fq maq=16 (that will throw away all reads with average quality below 16)
#Filter
#BBMap
#Quality
Jit
@jit.aber
Thread
By
Jit
2453 days ago
#Filter
out
#reads
with
#size
to discard reads containing many Ns. BBNorm (
https:/
/
sourceforge.net/
projects/
bbmap/
)
Jit
@jit.aber
Thread
By
Jit
2494 days ago
Filter
#blank
#lines
from a
#fasta
file using sed. $ sed '/^$/d' finalSample.fa > finalSample_filtered.fa
#Linux
#Filter
#FASTA
#SED