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The Wire
#ngs
Wire posts tagged with 'ngs'
Jit
@jit.aber
Thread
By
Jit
2815 days ago
Reads QC
http:/
/
evomicsorg.wpengine.netdna-cdn.com/
wp-content/
uploads/
2015/
01/
introQC.pdf
#Quality
#Reads
#NGS
Abhimanyu Singh
@abhimanyu
Thread
By
Abhimanyu Singh
2833 days ago
#Duplication
#FastQC
http:/
/
proteo.me.uk/
2013/
09/
a-new-way-to-look-at-duplication-in-fastqc-v0-11/
#Sequencing
#NGS
Jit
@jit.aber
Thread
By
Jit
2836 days ago
Plot the coverage in R
http:/
/
cnr.lwlss.net/
SeqCoverage/
#BAM
#SAM
#R
#NGS
#Plot
Jit
@jit.aber
Thread
By
Jit
2854 days ago
Extract reference nucleotide from BAM file: samtools view your.bam | awk '{print substr( $10, 100, 1)}'
#SAM
#BAM
#Samtools
#Tricks
#NGS
Jit
@jit.aber
Thread
By
Jit
2857 days ago
#NGS
basics
http:/
/
deeptools.readthedocs.io/
en/
latest/
content/
help_glossary.html
#Tutorial
#Help
Jit
@jit.aber
Thread
By
Jit
2892 days ago
Coming of age: ten years of next-generation sequencing technologies
http:/
/
www.nature.com/
nrg/
journal/
v17/
n6/
full/
nrg.2016.49.html
#Sequencing
#Technology
#NGS
#Updates
Jitendra Narayan
@admin
Thread
By
Jitendra Narayan
3004 days ago
A Multiscale Synteny Browser tool MizBee
http:/
/
www.cs.utah.edu/
~miriah/
mizbee/
Overview.html
#Synteny
#Browser
#Genome
#NGS
#ComparativeGenomics
Neelam Jha
@neelam
Thread
By
Neelam Jha
3115 days ago
Sometime NGS is just tiring
#ngs
#research
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3119 days ago
Genomic data analysis
http:/
/
www.bicnirrh.res.in/
workshop.php
#Genome
#Data
#Analysis
#NGS
#NIRRH
#Mumbai
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3149 days ago
Count the number of sequences in fastaq file. grep -c '^@' sample1.fq
#Fastaq
#Count
#Number
#Grep
#Dirty
#Oneliner
#NGS
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3204 days ago
http:/
/
massgenomics.org/
#NGS
#medical
genomics
Rahul Nayak
@rahul
Thread
By
Rahul Nayak
3213 days ago
Big Data: Astronomical or Genomical?
http:/
/
journals.plos.org/
plosbiology/
article?id=10.1371/
journal.pbio.1002195
#Future
#Genomics
#Growth
#Sequencing
#NGS
Jit
@jit.aber
Thread
By
Jit
3342 days ago
A universal genomic coordinate translator for comparative genomics
http:/
/
nedaz.github.io/
kraken/
#NGS
#Coordinate
#Translator
Jit
@jit.aber
Thread
By
Jit
3342 days ago
A Dockerized Next Generation Sequencing Pipeline
http:/
/
khp-informatics.github.io/
ngs/
#NGS
#Docker
#Annotation
Rahul Agarwal
@raag
Thread
By
Rahul Agarwal
3449 days ago
http:/
/
compbio.cs.brown.edu/
software/
#tools
#ngs
#seq
#SVs
#mutation
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