https://bioinformaticsonline.com/blog/archive/Strand/1438405200/1441083600? https://bioinformaticsonline.com/blog/view/23586/calling-narrow-and-broad-peaks-from-chip-seq-data Tue, 04 Aug 2015 05:06:03 -0500 https://bioinformaticsonline.com/blog/view/23586/calling-narrow-and-broad-peaks-from-chip-seq-data Know about the state-of-the-art algorithms implemented in Strand NGS for detecting the binding sites of transcription factor (narrow peaks) and enriched regions of histone modification (broad peaks) from ChIP-Seq data.
Read the benchmarking study on Calling narrow and broad peaks from ChIP-Seq data in Strand NGS by Rohit Gupta and Anita Sathyanarayanan. For more information, please contact us

]]> Strand https://bioinformaticsonline.com/blog/view/23584/integrated-mrna-and-microrna-transcriptome-analysis-in-strand-ngs Tue, 04 Aug 2015 05:04:46 -0500 https://bioinformaticsonline.com/blog/view/23584/integrated-mrna-and-microrna-transcriptome-analysis-in-strand-ngs Using a nasopharyngeal carcinoma case study, this paper highlights the integrated transcriptome analysis capabilities of Strand NGS demonstrating the identification of miRNA – mRNA interactions in regulatory networks.
Read the application note on Integrated mRNA and microRNA transcriptome analysis in Strand NGS by Veena Hedatale and Rohit Gupta. For more information, please contact us

]]> Strand https://bioinformaticsonline.com/blog/view/23582/integrative-rna-and-chip-seq-analysis-of-regulatory-t-cells Tue, 04 Aug 2015 05:03:19 -0500 https://bioinformaticsonline.com/blog/view/23582/integrative-rna-and-chip-seq-analysis-of-regulatory-t-cells Integrative RNA and ChIP-Seq analysis of regulatory T-cells , a Strand NGS application note describes how integrated multi-omics functionality in Strand NGS was used to find the regulatory role of FoxP3 in T-regulatory and T-helper cells. Learn how the gene expression profiles from RNA-Seq and FoxP3 DNA-protein binding sites from ChIP-Seq are integrated. For mor information, please write to us

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