<![CDATA[BOL: Blobsplorer]]> https://bioinformaticsonline.com/bookmarks/view/27821/blobsplorer? https://bioinformaticsonline.com/bookmarks/view/27821/blobsplorer Tue, 14 Jun 2016 10:28:58 -0500 https://bioinformaticsonline.com/bookmarks/view/27821/blobsplorer <![CDATA[Blobsplorer]]> Blobsplorer is a tool for interactive visualization of assembled DNA sequence data ("contigs") derived from (often unintentionally) mixed-species pools. It allows the simultaneous display of GC content, coverage, and taxonomic annotation for collections of contigs with a view to separating out those belonging to different taxa.

Blobsplorer is unlikely to be of use on its own as it requires contig data to be supplied in a format that involves considerable preprocessing (see below for a description). The easiest way to use Blobsplorer is as part of a workflow using scripts from here.

Address of the bookmark: http://nematodes.org/martin/blobsplorer/blobsplorer.html

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