<![CDATA[BOL: Bioinformatics tools and software]]> https://bioinformaticsonline.com/bookmarks/view/28290/bioinformatics-tools-and-software? https://bioinformaticsonline.com/bookmarks/view/28290/bioinformatics-tools-and-software Tue, 05 Jul 2016 10:02:26 -0500 https://bioinformaticsonline.com/bookmarks/view/28290/bioinformatics-tools-and-software <![CDATA[Bioinformatics tools and software]]> USEARCH >
Extreme high-throughput sequence analysis. Orders of magnitude faster than BLAST. MUSCLE >
Multiple sequence alignment. Faster and more accurate than CLUSTALW.

 UPARSE >
OTU clustering for 16S and other marker genes. Highly accurate OTU sequences and improved diversity measures. UCHIME >
Chimeric sequence detection. PILER >
De novo genome repeat finder. PILER-CR >
Detection of CRISPR repeats in bacterial genomes. QSCORE >
Compare two multiple alignments for benchmarking. PALS >
Whole-genome alignment. PREFAB >
Protein Reference Alignment Database. MSA benchmark collection >
Selected multiple alignment benchmarks in a standardized FASTA format.

Address of the bookmark: http://drive5.com/software.html

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