<![CDATA[BOL: BBMap help]]> https://bioinformaticsonline.com/bookmarks/view/29379/bbmap-help? https://bioinformaticsonline.com/bookmarks/view/29379/bbmap-help Mon, 10 Oct 2016 06:29:03 -0500 https://bioinformaticsonline.com/bookmarks/view/29379/bbmap-help <![CDATA[BBMap help]]>
BBMAP • a solution for everything
That content has been reformatted and it is being expanded to include more information.

There are common options for most BBMap suite programs and depending on the file extension the input/output format is automatically chosen/set.

Using BBMap

Mapping Nanopore reads

BBMap.sh has a length cap of 6kbp. Reads longer than this will be broken into 6kbp pieces and mapped independently.

More at https://www.biostarhandbook.com/tools/bbmap/bbmap-help.html

Address of the bookmark: https://www.biostarhandbook.com/tools/bbmap/bbmap-help.html

]]> Shruti Paniwala