<![CDATA[BOL: SNPGenie]]> https://bioinformaticsonline.com/bookmarks/view/31976/snpgenie? https://bioinformaticsonline.com/bookmarks/view/31976/snpgenie Thu, 30 Mar 2017 17:38:02 -0500 https://bioinformaticsonline.com/bookmarks/view/31976/snpgenie <![CDATA[SNPGenie]]> SNPGenie is a Perl script for estimating evolutionary parameters, mainly from pooled next-generation sequencing (NGS) single-nucleotide polymorphism (SNP) variant data. SNP reports (acceptable in a variety of formats) much each correspond to a single population, with variants called relative to a single reference sequence (one sequence in one FASTA file). Just run the main script, snpgenie.pl, in a directory containing the necessary input files, and we take care of the rest! For the earlier version, see Hughes Lab Bioinformatics Resource.

Address of the bookmark: https://github.com/hugheslab/snpgenie

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