<![CDATA[BOL: CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies]]> https://bioinformaticsonline.com/bookmarks/view/34922/camsa-a-tool-for-comparative-analysis-and-merging-of-scaffold-assemblies? https://bioinformaticsonline.com/bookmarks/view/34922/camsa-a-tool-for-comparative-analysis-and-merging-of-scaffold-assemblies Thu, 28 Dec 2017 09:10:26 -0600 https://bioinformaticsonline.com/bookmarks/view/34922/camsa-a-tool-for-comparative-analysis-and-merging-of-scaffold-assemblies <![CDATA[CAMSA :: a tool for Comparative Analysis and Merging of Scaffold Assemblies]]> CAMSA – is a tool for Comparative Analysis and Merging of Scaffold Assemblies, distributed both as a standalone software package and as Python library under the MIT license.

Main features:

  1. works with any number of scaffold assemblies in de-novo non-progressive fashion
  2. allows to simultaneously work with scaffold assemblies obtained from any in silico and in vitro techniques, supporting multiple existing formats via built-in converters
  3. creates an extensive report with several comparative quality metrics (both on assembly level and on the level of individual assembly points)
  4. constructs a merged combined scaffold assembly
  5. provides an interactive framework for a visual comparative analysis of the given assemblies

Address of the bookmark: https://cblab.org/camsa/

]]> Rahul Nayak