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	<title><![CDATA[BOL: proovread : large-scale high-accuracy PacBio correction through iterative short read consensus]]></title>
	<link>https://bioinformaticsonline.com/bookmarks/view/35061/proovread-large-scale-high-accuracy-pacbio-correction-through-iterative-short-read-consensus?</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/35061/proovread-large-scale-high-accuracy-pacbio-correction-through-iterative-short-read-consensus</guid>
	<pubDate>Fri, 05 Jan 2018 04:12:20 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/35061/proovread-large-scale-high-accuracy-pacbio-correction-through-iterative-short-read-consensus</link>
	<title><![CDATA[proovread : large-scale high-accuracy PacBio correction through iterative short read consensus]]></title>
	<description><![CDATA[<p>proovread : large-scale high-accuracy PacBio correction through iterative short read consensus</p>
<ul>
<li>outperforms PacBioToCA/LSC in terms of accuracy and contiguity/sensitivity (<a href="http://dx.doi.org/10.1093/bioinformatics/btu392">http://dx.doi.org/10.1093/bioinformatics/btu392</a>)</li>
<li>is easy to install/run/configure</li>
<li>supports various types of dat
<ul>
<li><strong>HiSeq/MiSeq&nbsp;</strong>(100-500bp)</li>
<li><strong>Unitigs</strong></li>
<li>454, ...</li>
</ul>
</li>
</ul>
<p>proovread maps high coverage data to pacbio reads (bwa mem, blasr, daligner) in multiple iterations.</p><p>Address of the bookmark: <a href="https://github.com/BioInf-Wuerzburg/proovread" rel="nofollow">https://github.com/BioInf-Wuerzburg/proovread</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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