<![CDATA[BOL: kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity]]> https://bioinformaticsonline.com/bookmarks/view/36817/kwip-the-k-mer-weighted-inner-product-a-de-novo-estimator-of-genetic-similarity? https://bioinformaticsonline.com/bookmarks/view/36817/kwip-the-k-mer-weighted-inner-product-a-de-novo-estimator-of-genetic-similarity Tue, 29 May 2018 08:37:53 -0500 https://bioinformaticsonline.com/bookmarks/view/36817/kwip-the-k-mer-weighted-inner-product-a-de-novo-estimator-of-genetic-similarity <![CDATA[kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity]]> The k-mer Weighted Inner Product.

This software implements a de novo, alignment free measure of sample genetic dissimilarity which operates upon raw sequencing reads. It is able to calculate the genetic dissimilarity between samples without any reference genome, and without assembling one.

 

De novo estimates of genetic relatedness from next-gen sequencing data https://kwip.readthedocs.org

Address of the bookmark: https://github.com/kdmurray91/kwip

]]> Rahul Nayak