<![CDATA[BOL: MCMCTREE: a phylogenetic program for Bayesian estimation of species divergence times]]> https://bioinformaticsonline.com/bookmarks/view/36852/mcmctree-a-phylogenetic-program-for-bayesian-estimation-of-species-divergence-times? https://bioinformaticsonline.com/bookmarks/view/36852/mcmctree-a-phylogenetic-program-for-bayesian-estimation-of-species-divergence-times Sat, 02 Jun 2018 07:40:06 -0500 https://bioinformaticsonline.com/bookmarks/view/36852/mcmctree-a-phylogenetic-program-for-bayesian-estimation-of-species-divergence-times <![CDATA[MCMCTREE: a phylogenetic program for Bayesian estimation of species divergence times]]> MCMCTREE is a phylogenetic program for Bayesian estimation of species divergence times using soft fossil constraints under various molecular clock models. This is part of the PAML package. In this tutorial I will analyze an easy example modified from dataset of Inoue et al. (2010). Here we conduct a commonly used time estimation method, "Approximate Likelihood Method", for the datasets including more than 10 species.

Address of the bookmark: http://www.fish-evol.com/mcmctreeExampleVert6/text1Eng.html

]]> Poonam Mahapatra