<![CDATA[BOL: ARCS: scaffolding genome drafts with linked reads]]> https://bioinformaticsonline.com/bookmarks/view/38481/arcs-scaffolding-genome-drafts-with-linked-reads? https://bioinformaticsonline.com/bookmarks/view/38481/arcs-scaffolding-genome-drafts-with-linked-reads Mon, 17 Dec 2018 17:40:28 -0600 https://bioinformaticsonline.com/bookmarks/view/38481/arcs-scaffolding-genome-drafts-with-linked-reads <![CDATA[ARCS: scaffolding genome drafts with linked reads]]> ARCS requires two input files:

  • Draft assembly fasta file
  • Interleaved linked reads file (Barcode sequence expected in the BX tag of the read header or in the form "@readname_barcode" ; Run Long Ranger basic on raw chromium reads to produce this interleaved file)

Address of the bookmark: https://github.com/bcgsc/ARCS/

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