<![CDATA[BOL: Synteny and Rearrangement Identifier (SyRI)]]> https://bioinformaticsonline.com/bookmarks/view/41604/synteny-and-rearrangement-identifier-syri? https://bioinformaticsonline.com/bookmarks/view/41604/synteny-and-rearrangement-identifier-syri Tue, 05 May 2020 10:37:10 -0500 https://bioinformaticsonline.com/bookmarks/view/41604/synteny-and-rearrangement-identifier-syri <![CDATA[Synteny and Rearrangement Identifier (SyRI)]]> SyRI is a comprehensive tool for predicting genomic differences between related genomes using whole-genome assemblies (WGA). The assemblies are aligned using whole-genome alignment tools, and these alignments are then used as input to SyRI. SyRI identifies syntenic path (longest set of co-linear regions), structural rearrangements (inversions, translocations, and duplications), local variations (SNPs, indels, CNVs etc) within syntenic and structural rearrangements, and un-aligned regions.

Address of the bookmark: https://schneebergerlab.github.io/syri/

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