<![CDATA[BOL: MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics]]> https://bioinformaticsonline.com/bookmarks/view/42619/metaeuk-sensitive-high-throughput-gene-discovery-and-annotation-for-large-scale-eukaryotic-metagenomics? https://bioinformaticsonline.com/bookmarks/view/42619/metaeuk-sensitive-high-throughput-gene-discovery-and-annotation-for-large-scale-eukaryotic-metagenomics Wed, 13 Jan 2021 19:29:32 -0600 https://bioinformaticsonline.com/bookmarks/view/42619/metaeuk-sensitive-high-throughput-gene-discovery-and-annotation-for-large-scale-eukaryotic-metagenomics <![CDATA[MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics]]> MetaEuk is a modular toolkit designed for large-scale gene discovery and annotation in eukaryotic metagenomic contigs. Metaeuk combines the fast and sensitive homology search capabilities of MMseqs2 with a dynamic programming procedure to recover optimal exons sets. It reduces redundancies in multiple discoveries of the same gene and resolves conflicting gene predictions on the same strand. MetaEuk is GPL-licensed open source software that is implemented in C++ and available for Linux and macOS. The software is designed to run on multiple cores.

Address of the bookmark: https://github.com/soedinglab/metaeuk

]]> Jit