<![CDATA[BOL: LncPipe:A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets]]> https://bioinformaticsonline.com/bookmarks/view/43384/lncpipea-nextflow-based-pipeline-for-comprehensive-analyses-of-long-non-coding-rnas-from-rna-seq-datasets? https://bioinformaticsonline.com/bookmarks/view/43384/lncpipea-nextflow-based-pipeline-for-comprehensive-analyses-of-long-non-coding-rnas-from-rna-seq-datasets Fri, 17 Sep 2021 01:57:02 -0500 https://bioinformaticsonline.com/bookmarks/view/43384/lncpipea-nextflow-based-pipeline-for-comprehensive-analyses-of-long-non-coding-rnas-from-rna-seq-datasets <![CDATA[LncPipe:A Nextflow-based pipeline for comprehensive analyses of long non-coding RNAs from RNA-seq datasets]]> The pipeline was developed based on a popular workflow framework Nextflow, composed of four core procedures including reads alignment, assembly, identification and quantification. It contains various unique features such as well-designed lncRNAs annotation strategy, optimized calculating efficiency, diversified classification and interactive analysis report. LncPipe allows users additional control in interuppting the pipeline, resetting parameters from command line, modifying main script directly and resume analysis from previous checkpoint.

Ref https://www.lncrnablog.com/lncpipe-a-nextflow-based-pipeline-for-identification-and-analysis-of-long-non-coding-rnas-from-rna-seq-data/

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Address of the bookmark: https://github.com/likelet/LncPipe

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