<![CDATA[BOL: fastv - detect virus]]> https://bioinformaticsonline.com/bookmarks/view/43639/fastv-detect-virus? https://bioinformaticsonline.com/bookmarks/view/43639/fastv-detect-virus Sat, 11 Dec 2021 08:04:10 -0600 https://bioinformaticsonline.com/bookmarks/view/43639/fastv-detect-virus <![CDATA[fastv - detect virus]]> fastv is an ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. It detects microbial sequences from FASTQ data, generates JSON reports and visualizes the result in HTML reports. This tool can be used to detect viral infectious diseases, like COVID-19. This tool supports both short reads (Illumina, BGI, etc.) and long reads (ONT, PacBio, etc.)

Address of the bookmark: https://github.com/OpenGene/fastv

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