<![CDATA[BOL: CrossMap: program for genome coordinates conversion between different assemblies]]> https://bioinformaticsonline.com/bookmarks/view/43722/crossmap-program-for-genome-coordinates-conversion-between-different-assemblies? https://bioinformaticsonline.com/bookmarks/view/43722/crossmap-program-for-genome-coordinates-conversion-between-different-assemblies Tue, 25 Jan 2022 17:59:32 -0600 https://bioinformaticsonline.com/bookmarks/view/43722/crossmap-program-for-genome-coordinates-conversion-between-different-assemblies <![CDATA[CrossMap: program for genome coordinates conversion between different assemblies]]> CrossMap is a program for genome coordinates conversion between different assemblies (such as hg18 (NCBI36) <=> hg19 (GRCh37)). It supports commonly used file formats including BAM, CRAM, SAM, Wiggle, BigWig, BED, GFF, GTF, MAF VCF, and gVCF.

Address of the bookmark: http://crossmap.sourceforge.net/

]]> Rahul Nayak https://bioinformaticsonline.com/bookmarks/view/43722/crossmap-program-for-genome-coordinates-conversion-between-different-assemblies#item-annotation-4024 Tue, 25 Jan 2022 18:00:03 -0600 https://bioinformaticsonline.com/bookmarks/view/43722/crossmap-program-for-genome-coordinates-conversion-between-different-assemblies#item-annotation-4024 <![CDATA[Comment by Rahul Nayak]]> https://www.researchgate.net/publication/357925950_FastRemap_A_Tool_for_Quickly_Remapping_Reads_between_Genome_Assemblies

]]> Rahul Nayak