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	<title><![CDATA[BOL: genomenotebook]]></title>
	<link>https://bioinformaticsonline.com/bookmarks/view/44307/genomenotebook?</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44307/genomenotebook</guid>
	<pubDate>Thu, 20 Apr 2023 13:19:01 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44307/genomenotebook</link>
	<title><![CDATA[genomenotebook]]></title>
	<description><![CDATA[<p><a href="https://dbikard.github.io/genomenotebook/">https://dbikard.github.io/genomenotebook/</a></p>
<h2>Install<a href="https://dbikard.github.io/genomenotebook/#install"></a></h2>
<pre><code>pip install genomenotebook</code></pre>
<h2>How to use<a href="https://dbikard.github.io/genomenotebook/#how-to-use"></a></h2>
<p>Create a simple genome browser with a search bar. The sequence appears when zooming in.</p>
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<pre><code><span><a href="https://dbikard.github.io/genomenotebook/#cb2-1"></a><span>import</span> genomenotebook <span>as</span> gn</span>
<span><a href="https://dbikard.github.io/genomenotebook/#cb2-2"></a></span>
<span><a href="https://dbikard.github.io/genomenotebook/#cb2-3"></a>g<span>=</span>gn.GenomeBrowser(genome_path, gff_path, init_pos<span>=</span><span>10000</span>)</span>
<span><a href="https://dbikard.github.io/genomenotebook/#cb2-4"></a>g.show()</span></code><button title="Copy to Clipboard"></button></pre>
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<p>Tracks can be added to visualize your favorite genomics data. See&nbsp;<code>Examples</code>&nbsp;for more !!!!</p><p>Address of the bookmark: <a href="https://dbikard.github.io/genomenotebook/" rel="nofollow">https://dbikard.github.io/genomenotebook/</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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