<![CDATA[BOL: CLAW: Chloroplast Long-read Assembly Workflow]]> https://bioinformaticsonline.com/bookmarks/view/44474/claw-chloroplast-long-read-assembly-workflow? https://bioinformaticsonline.com/bookmarks/view/44474/claw-chloroplast-long-read-assembly-workflow Wed, 21 Feb 2024 12:37:46 -0600 https://bioinformaticsonline.com/bookmarks/view/44474/claw-chloroplast-long-read-assembly-workflow <![CDATA[CLAW: Chloroplast Long-read Assembly Workflow]]> CLAW (Chloroplast Long-read Assembly Workflow) is an mostly-automated Snakemake-based workflow for the assembly of chloroplast genomes. CLAW uses chloroplast long-reads, which are baited out of larger read libraries (e.g., an Oxford Nanopore Technologies MinION read library derived from photosynthetic tissue), for assembly with Flye and/or Unicycler. CLAW was designed with the novice bioinformatician in mind - it is easy to install and easy to use, requiring only minimal user input.

Address of the bookmark: https://github.com/aaronphillips7493/CLAW

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