<![CDATA[BOL: AlfaPang: alignment free algorithm for pangenome graph construction]]> https://bioinformaticsonline.com/bookmarks/view/44887/alfapang-alignment-free-algorithm-for-pangenome-graph-construction? https://bioinformaticsonline.com/bookmarks/view/44887/alfapang-alignment-free-algorithm-for-pangenome-graph-construction Thu, 28 Aug 2025 02:56:35 -0500 https://bioinformaticsonline.com/bookmarks/view/44887/alfapang-alignment-free-algorithm-for-pangenome-graph-construction <![CDATA[AlfaPang: alignment free algorithm for pangenome graph construction]]> AlfaPang constructs variation graphs, leveraging its alignment-free and reference-free approach, based solely on intrinsic sequence properties. This design allows AlfaPang's runtime and memory usage to scale linearly with the size of input sequences, enabling it to handle significantly larger genome sets compared to other methods.

Address of the bookmark: https://github.com/AdamCicherski/AlfaPang

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