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	<title><![CDATA[BOL: August 2023]]></title>
	<link>https://bioinformaticsonline.com/news/archive/neelam/1690866000/1693544400?</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/44370/ncbiblast-2141-now-available</guid>
	<pubDate>Wed, 30 Aug 2023 02:36:13 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/44370/ncbiblast-2141-now-available</link>
	<title><![CDATA[NCBIBLAST+ 2.14.1 now available]]></title>
	<description><![CDATA[<p><a href="https://www.linkedin.com/feed/hashtag/?keywords=ncbiblast&amp;highlightedUpdateUrns=urn%3Ali%3Aactivity%3A7101231946264924160">#NCBIBLAST</a><span>+ 2.14.1 now available with improved documentation, faster and more reliable database downloads, and some bug fixes.&nbsp;</span></p><p>Check out the changes they made.</p><p>They added the&nbsp;<code><span>cleanup-blastdb-volumes.py</span></code>&nbsp;script to remove unused BLAST database volumes. Read the documentation&nbsp;<a href="https://www.ncbi.nlm.nih.gov/books/NBK592857/">here</a>.</p><p>They also switched the protocol from&nbsp;<code><span>ftp</span></code>&nbsp;to&nbsp;<code><span>https</span></code>&nbsp;to access BLAST databases for increased performance and reliability when downloading data from the NCBI with the&nbsp;<code><span>update_blastdb.pl</span></code>&nbsp;script.</p><p>And fixed a few bugs related to downloading data from the NCBI, and&nbsp;<code><span>mt_mode</span></code>&nbsp;crashing&nbsp;<code><span>blastn</span></code>&nbsp;and&nbsp;<code><span>blastx</span></code>.</p><p>Check out the&nbsp;<a href="https://www.ncbi.nlm.nih.gov/books/NBK131777/">release notes</a>.</p><p>Download&nbsp;<a href="https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.14.1/">BLAST+ 2.14.1</a></p><p>Questions or comments? Please write the&nbsp;<a href="https://support.nlm.nih.gov/support/create-case/">BLAST help desk</a>.</p><p><span><span>More info and download:</span>&nbsp;https://blast.ncbi.nlm.nih.gov/doc/blast-news/2023-BLAST-News.html</span></p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/44364/genbank-release-2570-is-now-available</guid>
	<pubDate>Wed, 23 Aug 2023 00:23:23 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/44364/genbank-release-2570-is-now-available</link>
	<title><![CDATA[GenBank release 257.0 is now available!]]></title>
	<description><![CDATA[<p><span>GenBank release 257.0 is now available! This release has 25.10 trillion bases and 3.69 billion records. Learn more:&nbsp;https://ncbiinsights.ncbi.nlm.nih.gov/2023/08/21/genbank-release-257/</span><a href="https://ow.ly/zHbV50PBE5o"><br /></a></p><p><a href="https://www.ncbi.nlm.nih.gov/genbank/?utm_source=ncbi_insights&amp;utm_medium=referral&amp;utm_campaign=genbank-release-20230821">GenBank</a>&nbsp;release 257.0 (8/15/2023) is now available on the&nbsp;<a href="https://ftp.ncbi.nlm.nih.gov/genbank/">NCBI FTP site</a>. This release has 25.10 trillion bases and 3.69 billion records.</p><p><strong>The current release has:</strong></p><ul>
<li>246,119,175 traditional records containing 2,112,058,517,945 base pairs of sequence data</li>
<li>2,631,493,489 WGS records containing 22,294,446,104,543 base pairs of sequence data</li>
<li>686,271,945 bulk-oriented TSA records containing 646,176,166,908 base pairs of sequence data</li>
<li>124,421,006 bulk-oriented TLS records containing 48,289,699,026 base pairs of sequence data</li>
</ul>]]></description>
	<dc:creator>Neel</dc:creator>
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