BOL: My posts on The Opportunity

Bioinformatician as Project Manager - Data Analysis, Next Generation Sequencing (m/f/d)

Mon, 24 Jun 2019 22:35:11 -0500

Project Manager Bioinformatics (m/w/d)
85560 Ebersberg, Germany
Full-time

Qualifications
Masters in Bioinformatics

https://www.jobvector.de/en/jobs/data-science-database/project-management/bioinformatician-project-manager-data-analysis-next-generation-sequencing-119533.html?suid=1563e2775c7ab17b2bb3029eee8c119bbf421948

Doctoral student (m / w / d) - mucosal immunology (Imaging)

Mon, 24 Jun 2019 22:27:25 -0500

Since its founding in 1815, the University Hospital Erlangen has been offering top-quality medicine. In diagnosis and therapy are the latest findings of medical research. More than 7500 employees from around 50 professions are needed to fulfill the manifold tasks of the University Hospital Erlangen.
tasks
The research goal is the analysis of the role of Itk (Tec Kinase) in chronic intestinal inflammation. The focus of the planned work is on immunological work such as cell culture, FACS, ELISA, qPCR analysis of clinical samples. The project is funded by third party funds and already established as part of a SFB project.
qualifications
Doctoral student (m / w / d) in the research field "Immunology of the Gastrointestinal tract".
-Degree in Natural Sciences (MSc or equivalent)
-Excellent Study
Skills -Found knowledge and skills of molecular biological, immunological and microscopy
techniques -Very good knowledge of English
-team
skills -responsibility, self-initiative, motivation and purposefulness would

also be beneficial:
-Experience in imaging
methods -experience desirable in cell culture, FACS, histochemistry
We offer
A safe, interesting job in a motivated open-minded research team. Careful and skilled training and support in the new challenge. A varied and responsible field of activity with individual development opportunities.
Comprehensive offers for health promotion
All services of the civil service incl. Additional provision of the Federal
and Länder pension funds (VBL)
Family-friendly environment and, where applicable, dormitory
places Crediting of professional experience possible
Contact for applications
Applications with curriculum vitae, certificates and letters of recommendation can preferably be sent by mail or postal mail to:

PD Dr. med. rer. nat. Dr. habil. med. Weigmann, Benno
University Hospital Erlangen
Medical Clinic 1 - Research
Hartmannstraße 14
91054 Erlangen
09131-8535885

https://www.jobvector.de/en/jobs/biology-life-sciences/research-education/naturwissenschaftlicher-doktorand-mukosale-immunologie-120008.html?suid=62e3e74c0250f5577074cb7c9fa0c2e655323ac8

Senior Software Developer / Bioinformatician @ Wellcome Trust Sanger Institute -- Hinxton/ Cambridgeshire, UK

Sat, 23 Dec 2017 15:21:05 -0600

BACKGROUND
We are looking for up to three Software Developers / Bioinformaticians to join a newly formed Cellular Genetics Informatics (CGI) team at the Wellcome Trust Sanger Institute. CGI is a computational support team responsible for providing efficient access to cutting-edge analysis methods for Cellular Genetics (www.sanger.ac.uk/scie[...]etics) faculty groups at the Sanger Institute. The Cellular Genetics department uses a combination of high throughput experimentation and computational tool development to understand the biology of cells, and leads a number of world-class research initiatives including the Human Induced Pluripotent Stem Cell Initiative (HIPSCI: www.hipsci.org) and Human Cell Atlas (www.humancellatlas.org). Our team's focus is the development and operation of scientific analysis workflows and tools for data analysis that support the department's research goals, as well as developing the infrastructure necessary to manage the efficient operation of those workflows.
RESPONSIBILITIES
This role will focus on development of robust production data analysis pipelines as well as implementing them on both high performance computing farm (LSF) and cloud-based (OpenStack) environments.
As part of the CGI team, the successful applicant would have access to Sanger's world-class computational resources, including an OpenStack private cloud environment, a 15000+ core computational cluster and many petabytes of high-speed distributed filesystems and object stores.
Recent graduates or current students in their final year are also encouraged to apply, although it is strongly desirable that any candidate has substantial development experience outside of coursework (e.g. active participation in open source projects or the pursuit of personal coding projects).
REQUIREMENTS
Degree in Computer Science or in a related quantitative field (e.g. Mathematics, Physics, Bioinformatics)
Substantial experience in either software development or bioinformatics analysis
Knowledge of core computer science concepts and practices
Skill in a combination of interpreted and compiled languages (e.g. Java, Python, C/C++, R, Ruby)
Experience with Git/GitHub
Experience with high performance computing environments (e.g. LSF or SGE)
Knowledge of virtualization/containerisation technologies (Docker, Singularity)
Knowledge of Linux based operating systems, libraries, and tools
Critical thinking skills and a familiarity with statistics (e.g. statistical distributions, significance tests)
Excellent communication and presentation skills
Motivation and attention to detail
TERMS
Permanent position
LOCALE
Hinxton, Cambridgeshire UK
COMPENSATION
Grade 2 (Software Developer) £40,345 to £48,818 dependant on experience
HOW TO APPLY
Please apply through the Sanger website. Please include a covering letter and CV with your application. The URL is jobs.sanger.ac.uk/wd/p[...]37347

For any position related questions please contact Vladimir Kiselev (vk6[at]sanger.ac.uk)
DEADLINE
5th February 2018
POLICY
Wellcome Trust Sanger Institute welcomes applications from all candidates irrespective of age, disability, gender, gender identity, sexual orientation, race, religion or belief, or marital or civil partnership status.

Postdoc position in computational biology/single-cell sequencing @ UCSF -- San Francisco, CA (US)

Sat, 23 Dec 2017 15:19:15 -0600

BACKGROUND
A Postdoc position is available in the Diaz laboratory, at the University of California, San Francisco (diazlab.ucsf.edu). Our lab applies single-cell profiling, genomics and other assays to clinical samples, to address problems in neuro-oncology and neuro-development.
RESPONSIBILITIES
The postdoc will develop statistical and computational tools, analyze, interpret and integrate single-cell and bulk 'omics data.
REQUIREMENTS
We are particularly interested in candidates with expertise in one of: bioinformatics, machine learning, applied statistics and/or network analytics. The position requires a PhD in a quantitative discipline, and programming skills. Previous experience in biology, bioinformatics and next-generation sequencing data analysis is preferred. But, applications from highly motivated candidates, with a strong background in some other area and the ability to learn quickly, are also quite welcome.
LOCALE
San Francisco, CA
HOW TO APPLY
Interested candidates should send an email to aaron.diaz[at]ucsf.edu, with the following:
CV
Cover letter, detailing programming experience, knowledge of mathematics and statistics, and bioinformatics or other data analysis experience. Please indicate your preferred start date.
Names and contacts of three references

Research assistant in computational biology

Wed, 24 Jun 2015 07:55:16 -0500

http://www.au.dk/en/about/vacant-positions/scientific-positions/stillinger/Vacancy/show/743161/5283/

Qualifications:
MSc degree in computer science, engineering, genetics or similar field with a strong emphasis on computational methods.

Deadline
01.08.2015