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	<title><![CDATA[BOL: Bioinformatics Articles links]]></title>
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	<pubDate>Sat, 10 Aug 2013 07:44:34 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/1535/bioinformatics-articles-links</link>
	<title><![CDATA[Bioinformatics Articles links]]></title>
	<description><![CDATA[<p>I found several useful bioinformatics articles which exaplain, define and elaborate&nbsp;the bioinformatics in scientific way. Therefore, instead of writting it again I decided to share it with you. Here is the list of some useful bioinformatics articles:</p><ul>
<li><a href="http://bioinfo.mbb.yale.edu/e-print/whatis-mim/gerstein_manuscript.pdf">What is Bioinformatics&nbsp;</a>- An introduction article by Mark Gerstein at Yale University.</li>
<li><a href="http://localhost/BOL/The%20powerful%20world%20of%20bioinformatics">The powerful world of bioinformatics</a></li>
<li><a href="http://news.bmn.com/hmsbeagle/99/notes/adapt">Bioinformatics: Key to 21st Century Biology</a></li>
<li><a href="http://www.ejb.org/content/vol3/issue2/full/4/index.html">The commercialization of bioinformatics by Phillip B.C. Jones</a></li>
<li><a href="http://smi-web.stanford.edu/pubs/SMI_Abstracts/SMI-98-0744.html">A Curriculum for Bioinformatics: The Time is Ripe&nbsp;</a>This article proproses requirements for a standard bioinformatics curriculum. By Russ Altman.</li>
<li><a href="http://www.er.doe.gov/production/ober/hug_top.html">Human Genome Research&nbsp;</a>A description of the Human Genome Project.</li>
<li><a href="http://www.the-scientist.com/yr2000/nov/prof_001127.html">Retooling for Bioinformatics&nbsp;</a>An article from The Scientist</li>
<li><a href="http://smi-web.stanford.edu/pubs/SMI_Abstracts/SMI-95-0586.html">A Programming Course in Bioinformatics&nbsp;</a>A discussion of the task of teaching an introductory bioinformatics course. By Russ Altman and John Koza.</li>
<li><a href="http://twod.med.harvard.edu/seqanal/">Sequence analysis&nbsp;</a>Keith Robison's guide to the exciting world of biosequence comparison! Useful background information on a variety of computational biology algorithms.</li>
<li><a href="http://www.d-trends.com/webs/BIN_92.html">Bioinformatics, Supercomputing, and Complex Genome Analysis&nbsp;</a>,<em>DOE/NIH Human Genome News&nbsp;</em>,&nbsp;<strong>4(5)&nbsp;</strong>January 1993.</li>
<li><a href="http://smi-web.stanford.edu/academics/MIS.html">Medical Informatics Training at Stanford University School of Medicine</a>An article from 1995 by Edward Shortliffe describing our medical informatics training program, the nature of the curriculum, the backgrounds of our students, and the career paths of our graduates.</li>
<li><a href="http://helix.biology.mcmaster.ca/721/access.html">Elementary Sequence Analysis - Database Searching&nbsp;</a>by B. Golding Jan 1996. Fasta, blast, blitz, blaze, flash, blocks.&nbsp;</li>
<li><a href="http://smi-web.stanford.edu/pubs/SMI_Abstracts/SMI-98-0731.html">Bioinformatics in Support of Molecular Medicine&nbsp;</a>A description of bioinformatics and its connection to clinical informatics. By Russ Altman.</li>
<li><a href="http://www.d-trends.com/webs/bio_business.html">Biology as a Business Venture and the Rise of Bioinformatics&nbsp;</a>, 1996.</li>
<li><a href="http://www.d-trends.com/webs/ics_preface.html">Preface to&nbsp;<em>Molecular Bioinformatics- Sequence Analysis&nbsp;</em></a>, 1997.</li>
<li><a href="http://www.d-trends.com/webs/gcb.html">Bioinformatics &amp; Cheminformatics in the Drug Discovery Cycle&nbsp;</a>, 1997.</li>
<li><a href="http://www.nature.com/cgi-taf/DynaPage.taf?file=/nature/journal/v389/n6649/full/389417a0_fs.html">Bioinformatics in a post-genomics age&nbsp;</a><em>Sept 1997</em></li>
<li><a href="http://www.d-trends.com/webs/BIN_97.html">Bioinformatics takes charge&nbsp;</a>,&nbsp;<em>Trends in Biotech.&nbsp;</em>,&nbsp;<strong>Vol. 16 No. 3 (170)</strong>, pp. 104-107, March 1998.</li>
<li><a href="http://www3.oup.co.uk/bioinformatics/hdb/Volume_14/Issue_07/html/btb119_gml.html">"A Curriculum For Bioinformatics: The Time Is Ripe"&nbsp;</a>An editorial from the journal BIOINFORMATICS-Bioinformatics, Vol 14, Issue 7, pages 549-550 (August 1998)</li>
<li><a href="http://www.d-trends.com/webs/BIN_98.html">Bioinformatics, pharma and farmers&nbsp;</a>,&nbsp;<em>Trends in Biotech.&nbsp;</em>,&nbsp;<strong>Vol. 17 No. 3 (182)&nbsp;</strong>, pp. 85-88. March 1999.</li>
<li><a href="http://www.sloan.org/programs/scitech_page1.htm">Bioinformatics/Computational Biology Programs&nbsp;</a>(May 1999)</li>
<li><a href="http://www.techfak.uni-bielefeld.de/bcd/ForAll/">Biocomputing For Everone&nbsp;</a>an introduction to biocomputing for the layperson published by the VSNS biocomputing division.</li>
<li><a href="http://www.uni-mainz.de/~cfrosch/bc4s/">Biocomputing For Schools&nbsp;</a>Another VSNS publication - this time aimed at highschool students, but fun to read for everyone.&nbsp; Includes articles on the application of bioinformatics to BSE research, and a ``Do-It-Yourself'' detailed example of a WWW search.</li>
<li><a href="http://cmgm.stanford.edu/~brutlag/Abstracts/brutlag94.html">Understanding the human genome&nbsp;</a>By D. L. Brutlag, in&nbsp;<em>Scientific American: Introduction to Molecular Medicine&nbsp;</em>, P. In Leder, D. A. Clayton, E. Rubenstein, Eds., (New York:&nbsp;<em>Scientific American&nbsp;</em>, 1994), pp. 153-168.</li>
<li><a href="http://www.d-trends.com/webs/viva.html">Viva bioinformatics, but who survives?&nbsp;</a>, 1999.</li>
<li><a href="http://recruit.sciencemag.org/feature/cperspec/bioinfo.shl">Bioinformatics: Playing The Numbers Game&nbsp;</a><em>June 1999</em></li>
<li><a href="http://www.technologyreview.com/magazine/sep99/regalado.asp">Mining the Genome&nbsp;</a><em>Sept 1999</em></li>
<li><a href="http://www.svhitech.com/20-21sv/20for.html">Commercialization of biological information and the rise of bioinformatics - Part I&nbsp;</a>, Nov/Dec 1999, 20/21, pp. 40-47.</li>
<li><a href="http://www.svhitech.com/22sv-s4/22bio1.html">Commercialization of biological information and the rise of bioinformatics - Part II&nbsp;</a>, Jan 2000, pp. 51-56.</li>
<li><a href="http://www.svhitech.com/23sv/23bio.html">Turbo-charging bioinformation for drug discovery&nbsp;</a>, Feb 2000, pp. 38-49.</li>
<li><a href="http://recruit.sciencemag.org/feature/advice/foc-bioin.shl">Bioinformatics: low supply, high demand&nbsp;</a><em>June 2000</em></li>
<li><a href="http://www.techreview.com/magazine/jul00/garber.asp">The Next Wave of the Genomics Business&nbsp;</a><em>July 2000</em></li>
<li><a href="http://www.sciam.com/2000/0700issue/0700howard.html">The Bioinformatics Gold Rush&nbsp;</a><em>July 2000</em></li>
<li><a href="http://nextwave.sciencemag.org/cgi/content/full/2000/08/23/1">Bioinformatics&nbsp;</a>.&nbsp;<a href="http://nextwave.sciencemag.org/">Next Wave&nbsp;</a>feature on careers in bioinformatics.<em>September 2000</em></li>
<li><a href="http://www.the-scientist.com/yr2000/nov/prof_001127.html">A prerequisite for working in thie field: love of computers&nbsp;</a>article from The Scientist (Nov 2000)</li>
<li><a href="http://www.technologyreview.com/magazine/sep00/mag_toc.asp">Sep/Oct 2000&nbsp;</a>issue of the MIT&nbsp;<a href="http://www.techreview.com/">Technology Review</a></li>
<li><a href="http://www.techfak.uni-bielefeld.de/bcd/ForAll/Econom/study.html">How to become a bioinformatics expert&nbsp;</a>, including a listing of<strong>European&nbsp;</strong>opportunities to study bioinformatics. Compiled by theVirtual School of Natural Sciences BioComputing Division.</li>
<li><a href="http://barton.ebi.ac.uk/papers/rev93_1/rev93_1.html">Protein Sequence Alignment and Database Scanning&nbsp;</a>Geoff Barton's review.</li>
<li><a href="http://ccsweb.njit.edu/~discdb/paper.html">Pattern matching and motifs&nbsp;</a></li>
<li><a href="http://www.cse.ucsc.edu/research/compbio/genex/genex.html">Knowledge-based Analysis of Microarray Gene Expression Data Using Support Vector Machines</a></li>
<li><a href="http://www.venus.co.uk/vhg/">VHG&nbsp;</a>Virtural HyperGlossary. Defines terms used in different subfields, currently Glycoscience, Protein Structure.</li>
<li><a href="http://bioinformatics.oupjournals.org/">LASSAP a LArge Scale Sequence compArison Package</a></li>
<li><a href="http://www.d-trends.com/webs/BIN_99.html">Bioinformatics in pre- and post-genomics eras&nbsp;</a>,&nbsp;<em>Trends in Biotech.&nbsp;</em>,<strong>Vol. 18&nbsp;</strong>, pp. 133-135, April 2000.</li>
<li><a href="http://www.svhitech.com/24SV/24bio1.html">Confluence of Western and Traditional Medicines and Future Prospectes - Part I&nbsp;</a>, Mar/Apr 2000, pp. 34-37.</li>
<li><a href="http://www.svhitech.com/24SV/24bio1.html">Confluence of Western and Traditional Medicines and Future Prospectes - Part II&nbsp;</a>, May/Jun 2000, pp. 66-74.</li>
<li><a href="http://www.oreilly.com/news/bioinformatics_0401.html">Computers + Biology = Bioinformatics&nbsp;</a><em>April 2001</em></li>
<li><a href="http://smi-web.stanford.edu/academics/articles/genSep01.pdf">Bioinformatics U.,&nbsp;<em>Genome Technology, September, 2001&nbsp;</em></a>An article from Genome Technology written by Nat Goodman about bioinformatics curricula.</li>
<li><a href="http://smi-web.stanford.edu/academics/articles/natOct25.pdf">Training in a Hybrid Discipline,&nbsp;<em>Nature, October 25, 2001&nbsp;</em></a>An article from Nature written by Potter Wickare and Paul Smaglik on bioinformatics training programmes in North America.</li>
<li><a href="http://www.the-scientist.com/yr2002/sep/prof1_020902.html">Bioinformatics Knowledge Vital to Careers - Competition from mathematicians and computer scientists compels biologists to become computational&nbsp;</a>article from The Scientist (Sept 2002)</li>
<li><a href="http://www.sciencemag.org/cgi/content/full/290/5491/471">The babel of bioinformatics&nbsp;</a>By Teresa Attwood,&nbsp;<em>Science&nbsp;</em>, 5491: 471 (2000).</li>
<li><a href="http://www.sciencemag.org/cgi/content/full/289/5488/2309">The quiet revolution: Biodiversity informatics and the internet&nbsp;</a>By Frank A. Bisby,&nbsp;<em>Science&nbsp;</em>, 289: 2309 (2000).</li>
<li><a href="http://www.nature.com/cgi-taf/dynapage.taf?file=/nature/journal/v409/n6822/full/409758a0_fs.html">Are you ready for the revolution?&nbsp;</a>By Declan Butler,&nbsp;<em>Nature&nbsp;</em>, 409: 758-760 (2001).</li>
<li><a href="http://www.businessweek.com/2000/00_15/b3676117.htm">Beyond the genome: Biotech's next holy grail&nbsp;</a>By Ellen Licking,&nbsp;<em>Business Week&nbsp;</em>, April 10, 2000.</li>
<li><a href="http://www.businessweek.com/2000/00_24/b3685001.htm">The genome explained&nbsp;</a>By Ellen Licking,&nbsp;<em>Business Week&nbsp;</em>, June 12, 2000.</li>
<li><a href="http://www.sfgate.com/cgi-bin/article.cgi?file=/chronicle/archive/2001/03/04/CS170178.DTL">Why bioinformatics is hot career&nbsp;</a>By Stacey Wells,&nbsp;<em>San Francisco Chronicle&nbsp;</em>, March 4, 2001.</li>
<li><a href="http://www.businessweek.com/bwdaily/dnflash/jun2001/nf2001067_198.htm">Proteomics: Beyond the genome&nbsp;</a>Edited by Patricia O'Connell, Business Week Online, June 7, 2001.</li>
<li><a href="http://www.washingtonpost.com/wp-dyn/articles/A23870-2002Mar13.html">A true believer dismisses indifference to bioinformatics&nbsp;</a>By Terence Chea,&nbsp;<em>Washington Post&nbsp;</em>, March 14, 2002.</li>
<li><a href="http://www.wired.com/news/medtech/0,1286,51428,00.html">Genome map on a grain of rice&nbsp;</a>By Kristen Philipkoski,&nbsp;<em>Wired News&nbsp;</em>, March 29, 2002.</li>
<li><a href="http://www.bio-itworld.com/archive/061202/class.html">Informatics moves to the head of the class&nbsp;</a>By Beth Schachter,&nbsp;<em>Bio-IT World&nbsp;</em>, June 12, 2002.</li>
<li><a href="http://www.bio-itworld.com/archive/081302/odyssey.html">The proteomics odyssey&nbsp;</a>By Malorye Branca,&nbsp;<em>Bio-IT World&nbsp;</em>, Aug. 13, 2002.</li>
<li><a href="http://news.com.com/2100-1001-956153.html">Dell goes nuts for clusters&nbsp;</a>By Michael Kanellos,&nbsp;<em>CNET News.com&nbsp;</em>, Sept. 2, 2002.</li>
<li><a href="http://www.bio-itworld.com/news/090502_report1114.html">IBM teams with TurboGenomics&nbsp;</a>By Salvatore Salamone,&nbsp;<em>Bio-IT World&nbsp;</em>, Sept. 5, 2002.</li>
<li><a href="http://www.bio-itworld.com/archive/090902/pharma.html">The new, new pharmacogenomics&nbsp;</a>By Malorye Branca,&nbsp;<em>Bio-IT World&nbsp;</em>, Sept. 9, 2002.</li>
<li><a href="http://www.bio-itworld.com/news/091702_report1218.html">RLX introduces a biocluster in a box&nbsp;</a>By Salvatore Salamone,&nbsp;<em>Bio-IT World&nbsp;</em>, Sept. 17, 2002.</li>
<li><a href="http://www.bio-itworld.com/news/092402_report1242.html">CombinatorX gets $40 million to look for drug synergies&nbsp;</a>By Salvatore Salamone,&nbsp;<em>Bio-IT World&nbsp;</em>, Sept. 24, 2002.</li>
<li><a href="http://www.bio-itworld.com/archive/100902/dna.html">Calculating with DNA&nbsp;</a>By Salvatore Salamone,&nbsp;<em>Bio-IT World&nbsp;</em>, October 2002.</li>
<li><a href="http://www.itworld.com/Tech/2987/021008dnachip/">Hitachi Soft develops low-cost human genome DNA chip&nbsp;</a>By Kuriko Miyake,&nbsp;<em>ITworld.com&nbsp;</em>, Oct. 8, 2002.</li>
<li><a href="http://www.newsfactor.com/perl/story/19772.html">IBM chooses Linux for 'Blue Gene' supercomputer&nbsp;</a>By Lisa Gill,<em>NewsFactor Network&nbsp;</em>, Oct. 24, 2002.</li>
<li><a href="http://www.cbsnews.com/stories/2002/10/29/tech/main527403.shtml">The international 'HapMap' project&nbsp;</a><em>cbsnews.com&nbsp;</em>, Oct. 29, 2002.</li>
<li><a href="http://www.upi.com/view.cfm?StoryID=20021101-053230-6291r">US stem cell policy deters investors&nbsp;</a>By Steve Mitchell,&nbsp;<em>UPI&nbsp;</em>, Nov. 2, 2002.</li>
<li><a href="http://www.trnmag.com/Stories/2002/111302/Biochip_sprouts_DNA_strands_111302.html">Biochip sprouts DNA strands&nbsp;</a>By Kimberly Patch,&nbsp;<em>Technology Research News&nbsp;</em>, Nov. 13, 2002</li>
<li><a href="http://www.bio-itworld.com/news/121002_report1674.html">Genomics consolidation &iuml;&iquest;&frac12; no pain, no gain&nbsp;</a>By Malorye Branca,&nbsp;<em>Bio-IT World&nbsp;</em>, Dec. 10, 2002.</li>
<li><a href="http://www.newscientist.com/news/news.jsp?id=ns99993243">Data stored in multiplying bacteria&nbsp;</a>By Natasha McDowell,<em>NewScientist.com&nbsp;</em>, Jan. 3, 2003.</li>
<li><a href="http://www.sciencedaily.com/releases/2003/03/030305081425.htm">Cowabunga! Scientists to start Bovine Genome Project&nbsp;</a><em>Science Daily&nbsp;</em>, March 5, 2003.</li>
<li><a href="http://www.the-scientist.com/memberloginreject.htm">Computational Analysis of Complexity in Gene Expression Arrays</a></li>
<li><a href="http://capb.dbi.udel.edu/main/BioCon_2003_sld/day+chen_final.pdf">Building your own Bioinformatics Supercomputer for Cheap Using Grid Technology</a></li>
<li><a href="http://www.utexas.edu/students/compbio/html/c.html#7">Career Advice for Computational Biology&nbsp;</a>By Amjad-Ali Khoja at U. Texas.</li>
<li><a href="http://www.pnas.org/">Proceedings of the National Academy of Sciences</a></li>
<li><a href="http://www.biochem.ucl.ac.uk/bsm/dbbrowser/jj/prefacefrm.html">A Practical Guide to protein sequence and structure analysis&nbsp;</a>at UCL</li>
</ul><p>Feel free to add more useful article links below by commenting on this page. Your comments are welcome.</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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