BOL: Related items

SRF/JRF Bioinformatics at National Bureau of Animal Genetic Resources

Thu, 26 Nov 2015 01:54:07 -0600

National Bureau of Animal Genetic Resources

SRF Job vacancies in National Bureau of Animal Genetic Resources (NBAGR) on contractual basis

No. of Posts : 03

Qualifications : Master degree in any one of discipline/ Subjects Biotechnology/Bioinformatics/Life Sciences/ Computer Applications with 4 years/5 years of Bachelor’s degree. Candidates having post graduate degree in above mentioned subjects with 3 years Bachelor’s degree should be NET qualified.

Note : i. The Ph.D. Degree holders are eligible for the posts. ii. The Master’s degree holders with the integrated degrees like B.Tech. & M. Tech. (5 years) are eligible. iii. Graduates with three years Bachelor’s degree, who have acquired professional Master’s degree (3 years) like M.Sc. (Ag.), Masters in Computer Applications, M. Tech., etc., are eligible.

Desirable : The candidates should have zeal to work in R environment and NGS data analysis

Emolument : Rs. 28,000/-

Age Limit : 35 year for Men and 40 years for Women in case of SRF on the date of Interview.
How to apply

Walk-in-Interview is proposed to be held at National Bureau of Animal Genetic Resources, Karnal (Haryana)-132 001 at 10:30 AM on 02.12.2015. Interested candidates may attend Walk-in-Interview at 10:30 AM on 02.12.2015 alongwith original certificates and typed bio-data with one set of attested copies of each their certificates with passport size photograph.

CIAB Recruits Scientist, Engineer, Informatics Officer

Sat, 28 Nov 2015 03:40:28 -0600

Center of Innovative and Applied Bioprocessing (CIAB) - Punjab

Center of Innovative and Applied Bioprocessing (CIAB) invites applications to recruit on vacant posts of Scientist, Associate Plant Manager/ Plant Engineer, Informatics Officer. Applications against these Government Jobs can be submitted on or before 7th January 2016.
CIAB Vacancy 2015 Details

9. Research & Development – Informatics Officer
Qualification: M. Tech or M.E. in computer science or information technology or bioinformatics with 4 years of R&D experience (after Master’s Degree) in an R&D organization with work profile of large data assembly, analysis.
Age Limit: 45 years
How to Apply : Duly filled-in applications in prescribed application format along with copies of required documents should be reach to: Chief Exec

ASSISTANT PROFESSOR Bioinformatics at ALAGAPPA UNIVERSITY

Thu, 03 Dec 2015 23:30:43 -0600

ALAGAPPA UNIVERSITY
Recruitment and Sarkari Naukri for the Post of ASSISTANT PROFESSOR Bioinformatics
Job Description UGC scale of pay is applicable. For eligibility qualifications and other norms, please refer to the ?Instructions to the Candidates? available with the application forms which can be had on payment of Rs.520/- inclusive of Rs.20/- for postage. For SC/ST, Rs.320/- inclusive of Rs.20/- for postage on enclosure of a copy of the community certificate. Payment is to be made by means of Demand Draft drawn on any nationalized bank in favour of ?The Registrar, Alagappa University? payable at Karaikudi. Candidates can also download the application form and instructions to the candidates from httpwww.alagappauniversity.ac Filled-in application should reach on or before 19.10.2015
Salary for Job : Rs.15600-39100+AGP Rs.6000
Education : Good academic record with at least 55 marks (or an equivalent grade in a point scale wherever grading system is followed) at the Masters Degree level in a relevant subject from an Indian University, or an equivalent degree from an accredited foreign university. Besides fulfilling the above qualifications, the candidate must have cleared the National Eligibility Test (NET) conducted by the UGC, CSIR or similar test accredited by the UGC like SLET/SET.Notwithstanding anything contained in sub-clauses (i) and (ii) above, the candidates, who are, or have been awarded a Ph.D. degree in accordance with the University Grants Commission (Minimum Standards and Procedure for Award of Ph.D. Degree) Regulations 2009, shall be exempted from the requirement of the minimum eligibility condition of NET/SLET/SET for recruitment and appointment of Assistant Professor or equivalent positions in Universities/Colleges/Institutions.
Number of Vacancies : 02
Naukri Location : Other City(s) in Tamil Nadu
Address : KARAIKUDI ? 630 003
Last Date to Apply : 2015-12-04
Apply Process : written test/interview

MAKER

Jitendra Narayan — Sun, 07 Feb 2016 15:59:24 -0600

MAKER is a portable and easily configurable genome annotation pipeline.Its purpose is to allow smaller eukaryotic and prokaryotic genome projects to independently annotate their genomes and to create genome databases. MAKER identifies repeats, aligns ESTs and proteins to a genome, produces ab-initio gene predictions and automatically synthesizes these data into gene annotations having evidence-based quality values.

More at http://www.yandell-lab.org/software/maker.html

Address of the bookmark: http://www.yandell-lab.org/software/maker.html

liftover

Jitendra Narayan — Mon, 08 Feb 2016 15:45:03 -0600

Convenient conversions between genome assemblie. The liftover package makes it easy to remap genomic coordinates to a different genome assembly.

More at https://github.com/aaronwolen/liftover

https://www.bioconductor.org/help/workflows/liftOver/

Address of the bookmark: https://github.com/aaronwolen/liftover

Stacks

Jitendra Narayan — Wed, 24 Feb 2016 15:52:30 -0600

Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

More at http://catchenlab.life.illinois.edu/stacks/

Address of the bookmark: http://catchenlab.life.illinois.edu/stacks/

scikit-learn

Jitendra Prajapati — Mon, 29 Feb 2016 17:39:24 -0600

Machine Learning in Python

Simple and efficient tools for data mining and data analysis
Accessible to everybody, and reusable in various contexts
Built on NumPy, SciPy, and matplotlib
Open source, commercially usable - BSD license

More at http://scikit-learn.org/stable/index.html

Address of the bookmark: http://scikit-learn.org/stable/auto_examples/index.html

PhyloGrapher - Graph Visualization Tool

Jitendra Prajapati — Wed, 06 Apr 2016 19:06:48 -0500

PhyloGrapher is a program designed to visualize and study evolutionary relationships within families of homologous genes or proteins (elements).PhyloGrapher is a drawing tool that generates custom graphs for a given set of elements. In general, it is possible to use PhyloGrapher to visualize any type of relations between elements.

More at http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html

Address of the bookmark: http://www.atgc.org/PhyloGrapher/PhyloGrapher_Welcome.html

SLURM

Jit — Wed, 04 May 2016 05:13:21 -0500

SLURM workload manager software, a free open-source workload manager designed specifically to satisfy the demanding needs of high performance computing.

This page is a HOWTO guide for setting up a SLURM installation, currently focused on a CentOS 7 Linux OS. Please send feedback to Ole.H.Nielsen /at/ fysik.dtu.dk.

See the SLURM homepage (also https://computing.llnl.gov/linux/slurm/).

Address of the bookmark: https://wiki.fysik.dtu.dk/niflheim/SLURM

Professor (all levels) in Bioinformatics and Computational Biology

Tue, 22 Nov 2016 05:43:38 -0600

King Abdullah University of Science and Technology (KAUST) (kaust.edu.sa) is seeking a highly motivated and skilled faculty member for the Bioinformatics track whose research focuses on development of methods and tools for Bioinformatics and Computational Biology.
KAUST is an international, graduate-level research university dedicated to advancing science and technology through interdisciplinary research, education, and innovation. Located on the shores of the Red Sea in Saudi Arabia, KAUST offers superb research facilities, generous assured research funding, and internationally competitive salaries, attracting top international faculty, scientists, engineers, and students to conduct fundamental and goal-oriented research to address the world’s pressing scientific and technological challenges in the areas of food, water, energy, and the environment.
The successful applicant is expected to develop world-leading research in domain of bioinformatics/computational biology with focus on development of novel computational approaches for efficient and accurate methods of analyzing biological phenomena at molecular level. The faculty member will be part of the Computational Bioscience Research Center (CBRC) within the Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division. The position will remain open until filled.

Requirements:

PhD or equivalent in a Computer Science, Mathematics or Engineering discipline. Candidates should be well-established within the research field relevant to the position grade. They should demonstrate original research and experience at the highest international level.

Responsibilities and tasks:

Research competence in the following areas is preferred:
Analysis of next generation sequencing (NGS) and other ‘omics’ data (e.g. CAGE, ChIP-Seq, DHS, RNA-Seq, Ribo-Seq, proteomic, metabolic and NMR spectra, etc.).
Signaling, regulatory and metabolic pathways analysis.
Development of tools (web-based and standalone) suited for efficient computational biology/bioinformatics.

Visit cemse.kaust.edu.sa to apply.