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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/11030?offset=30</link>
	<atom:link href="https://bioinformaticsonline.com/related/11030?offset=30" rel="self" type="application/rss+xml" />
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/11000/professorassociate-professor-assistant-professor-at-chettinad-academy-of-research-and-education</guid>
  <pubDate>Sat, 24 May 2014 00:00:15 -0500</pubDate>
  <link></link>
  <title><![CDATA[Professor/Associate Professor/ Assistant Professor at Chettinad Academy of Research and Education]]></title>
  <description><![CDATA[
<p>OPEN FACULTY POSITION</p>

<p>Chettinad Academy of Research and Education (CARE) invites applications from eligible and translational research-oriented candidates to the posts of Professor/Associate Professor/ Assistant Professor  Computational Biology, Bioinformatics, and Pharmaceutical Chemistry.</p>

<p>Emoluments: As per UGC norms (Adequate Compensation for Postdoctoral/Teaching experience)</p>

<p>Candidates fulfilling the eligibility criteria as per the UGC norms can send their full CV with copies of certificates and reference letters to the following address by post or by e-mail on or before 31st May 2014</p>

<p>The Registrar,<br />Chettinad Academy of Research and Education,<br />Chettinad Health City<br />Kelambakkam, Chennai 603 103<br />Tamil Nadu<br />T +91 (0)44 4741 1000<br />F +91 (0)44 4741 1011<br />Email: jobs @chettinadhealthcity.com</p>

<p>Advertisement: http://182.73.176.163/chc/ads2014.pdf</p>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/11311/stephen-friend-the-hunt-for-unexpected-genetic-heroes</guid>
	<pubDate>Sat, 31 May 2014 14:31:47 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/11311/stephen-friend-the-hunt-for-unexpected-genetic-heroes</link>
	<title><![CDATA[Stephen Friend: The hunt for "unexpected genetic heroes"]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/Yagdvqn2YMU" frameborder="0" allowfullscreen></iframe>What can we learn from people with the genetics to get sick — who don't? With most inherited diseases, only some family members will develop the disease, while others who carry the same genetic risks dodge it. Stephen Friend suggests we start studying those family members who stay healthy. Hear about the Resilience Project, a massive effort to collect genetic materials that may help decode inherited disorders.

TEDTalks is a daily video podcast of the best talks and performances from the TED Conference, where the world's leading thinkers and doers give the talk of their lives in 18 minutes (or less). Look for talks on Technology, Entertainment and Design -- plus science, business, global issues, the arts and much more.
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Follow TED news on Twitter: http://www.twitter.com/tednews
Like TED on Facebook: https://www.facebook.com/TED

Subscribe to our channel: http://www.youtube.com/user/TEDtalksDirector]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/14756/roderic-guigo-lab</guid>
  <pubDate>Mon, 01 Sep 2014 17:13:00 -0500</pubDate>
  <link></link>
  <title><![CDATA[Roderic Guigó Lab]]></title>
  <description><![CDATA[
<p>Research in our group focuses on the investigation of the signals involved in gene specification in genomic sequences (promoter elements, splice sites, translation initiation sites, etc…). We are interested both in the mechanism of their recognition and processing, and in their evolution. In addition, but related to this basic component of our research, our group is also involved in the development of software for gene prediction and annotation in genomic sequences. Our group also actively participates in the analysis of many eukaryotic genomes and it in involved in the NIH-funded ENCODE project. Furthermore we are members of two large cancer-studies consortia (chronic lymphocytic leukemia "CLL" and Breast Cancer -Hospital del Mar/CRG/Roche-).  <br /> <br />More at http://big.crg.cat/computational_biology_of_rna_processing</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/17751/jrf-in-bioinformatics-inmas-drdodelhi</guid>
  <pubDate>Wed, 01 Oct 2014 07:01:07 -0500</pubDate>
  <link></link>
  <title><![CDATA[JRF in Bioinformatics @ INMAS, DRDO,Delhi]]></title>
  <description><![CDATA[
<p>Institute of Nuclear Medicine and Allied Sciences (INMAS), Delhi under the aegis of Defence Research and Development Organisation (DRDO), is engaged in research and developmental work in radiation sciences, Neuro-Computing and Medical Image Processing. INMAS is looking for meritorious young researchers for pursuing research in the frontier areas at INMAS. The Institute invites applications from young and meritorious Indian nationals who are creative, have passion and desire to pursue R&amp;D in frontier areas. INMAS possesses ambience of a research cum academic institute coupled with an advanced R&amp;D infrastructure in a mission mode. It provides the best infrastructure, motivation and personality development prospects for talented students, dreaming of unparalleled success in their professional endeavors. INMAS provides state of the art research facilities for undertaking pioneering research with defence applications. </p>

<p>JRF (Maximum Tenure‐ Five Years: 2yrs as JRF and 3yrs  as SRF) 	<br />A first class Master’s Degree in Bioinformatics (likely 2 posts) 	<br />Around Rs 16,000/ Plus 30% HRA (as per rules of funding agency)</p>

<p>Applications are invited from candidates possessing the above qualifications. The upper age limit is as on the last date for receipt of application. (5 years relaxation to SC/ST candidates, 3 years to OBC candidates, and other entitled categories as per Govt rules). Actual No. of vacancies may vary.</p>

<p>Application form can be download from the website www.drdo.gov.in and E Mailed to inmashrd@gmail.com.<br />Last date to apply by email is 1700 hrs on 15 Oct 2014<br />Incomplete applications are liable to be rejected.<br />Confirmation will be sent to short-listed candidates through email only<br />Antecedents of selected candidates will be verified.<br />Written Test will be conducted from 0930-1030 hrs. Latecomers will not be considered.<br />Candidates will be required to produce certificates/testimonials in original at the time of interview.<br />It may please be noted that offer of Fellowship does not confer on fellows any right for absorption in DRDO.<br />Candidates should carry photocopy of Application form sent by email with them.<br />No TA/DA will be paid for attending interview &amp; on joining.<br />Last date to apply by email is 1700 hrs on 15 Oct 2014</p>

<p>More at http://drdo.gov.in/drdo/English/jrf29092014.pdf<br />http://drdo.gov.in/drdo/English/index.jsp?pg=inmas29092014.jsp</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/19979/zhang-lab</guid>
  <pubDate>Sun, 28 Dec 2014 12:43:08 -0600</pubDate>
  <link></link>
  <title><![CDATA[Zhang Lab]]></title>
  <description><![CDATA[
<p>We develop and use integrative bioinformatics approaches to extract biological meanings from experimental data and generate hypotheses for experimental validation. Please explore our website to learn more about our people and our research.</p>

<p>More at http://bioinfo.vanderbilt.edu/zhanglab/</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/21096/how-to-prepare-your-bioinformatics-cv</guid>
	<pubDate>Mon, 09 Feb 2015 01:50:01 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/21096/how-to-prepare-your-bioinformatics-cv</link>
	<title><![CDATA[How to Prepare your Bioinformatics CV ?]]></title>
	<description><![CDATA[<p>Preparing a CV is also an art as well as a requirement for a person applying for a job .<br /> Curriculum Vitae is the first impression on the employer so it should be the best.How It can be the best can be learnt.Here is a link where you can get guidelines on how CV can be prepared and a sample also. Preparing your own Curriculum Vitae can seem a daunting task, quite apart from what to put in and what to leave out, describing your own strengths and abilities isn't easy. What we have tried to do with the following guidelines is to make the whole process a much easier one and ensure that you end up with a professional document which shows you how to pitch your skills and stand out from the crowd. In the current economic and employment climate, employers are looking to consistently improve on productivity and match a prospective employee's skills and experience with the job needs, both now and in the future.<br /> <strong><br /> Presentation and layout</strong><br /> Always ensure that your CV is laser-printed on white, good quality paper, use a clean typeface and don't go smaller than 12 point.<br /> The use of sub-headings (e.g. Personal details, career history, etc.) will help potential employers glean the information they require with ease.<br /> There should be clear spaces between category headings for easy clarification and definition.<br /> Your name, address and phone number(s) should form the start of the document. If you are giving a work number add the following - 'please use with discretion.'<br /> Commencing with your present or most recent employer, state your career history. Then list your professional qualifications. If you have been working for many years list your academic qualifications and a very brief mention as to your college or schooling.<br /> If you are just commencing your working life, having previously been a student, provide more in depth knowledge regarding your academic achievements to date.<br /> <br /> <strong>Content</strong></p><p>Starting with your current or most recent employment provide details of your position as follows:</p><ul>
<li>A chronological CV should be arranged in reverse chronological order. It should be apparent immediately where you are now.</li>
<li>Remember that an application form is limited to the few things that a particular institution wants to know about everybody. A CV lets you give information that is unique to you. Add all your key accomplishments and activities in the initial draft. In subsequent drafts, you can remove information that may not be pertinent.</li>
<li>Resist the temptation to append explanatory sentences or language, which will distract the reader from the basic information being presented. The language of a CV is abbreviated and succinct. When applying for residency training, you will have the opportunity to express yourself in a personal or biographical statement. In the future, when applying for a job or some other type of position, you will want to include an appropriate cover letter with your CV to explain your particular qualifications and strengths for the position.</li>
<li>Don&rsquo;t despair if your CV doesn&rsquo;t resemble those of other students who are applying to the same residency program. Everybody&rsquo;s CV is different. Even if everyone used the same format suggested in this section, your CV will not resemble others&rsquo; because it doesn&rsquo;t have the same content. No residency program director is looking for a specific CV style. You will receive points for neatness, and readability.</li>
<li>Be honest. If you haven&rsquo;t accomplished anything in a particular category, leave it out. Don&rsquo;t create accomplishments to fill in the spaces. You can be specific about your level of participation in a project or activity, but don&rsquo;t be misleading (i.e., you can say you coordinated membership recruitment for your AMSA chapter, but don&rsquo;t say you were &ldquo;president&rdquo; unless you were).</li>
</ul><ul>
<li>Job title - time that you have held this position</li>
<li>The key tasks and responsibilities that comprise this role's requirements - notable achievements whilst in the role</li>
<li>Where possible quantify your achievements with precise facts and figures, e.g. managed junior staff, handled department budget, prepared management reports</li>
<li>Expand on the skills you are using in your current job which you believe will be valuable in the position(s) for which you are applying</li>
</ul><p>It is not necessary to state the reason you are leaving your current position. This will be a topic for conversation when you are invited for interview or can be covered in your letter of application.<br /> For all previous employment, unless one appointment was more significant than your current or last position, keep details brief i.e. the name of the company, job title, period of employment and the job.<br /> Be sure there are no gaps in your career history - unless for example you took a year out to travel, in which case make reference to this under Interests/Hobbies.<br /> If you are a student just starting work, give any evidence you can to demonstrate your practical skills e.g. school prefect, event organisation, member of sports team, contributor to college magazine or voluntary work.<br /><br /> You are under no obligation to disclose marital status, age or whether or not you have children unless these are specific criteria for selection for a position that you are interested in.<br /> Consider what examples (interests/ hobbies) you can give to show that you match the selection criteria.<br /><br /> If they want someone to work as part of a large team, remember to say if you belong to a local organisation or if you are part of a sports team.<br /><br /> If they want someone who will work on their own for large periods of time, make reference to an Open University course you are considering undertaking.<br /><br /> Your primary objective is to convince the prospective employer that you have the requisite skills, experience and hunger to do the job.<br /><br /> Your CV should be no more than two A4 pages and as every employer is different remember to customise your CV to every job you go after.</p><p>There are abundant books on the contents and presentation of a general CV. A BMJ article published in 1978, offering doctors guidance on how to prepare a CV, has been reprinted in the widely read How to do it series.1 2 A survey among postgraduate deans and training advisers at regional colleges found that the contents and presentation of a model CV for doctors in training has been published.3 It is perhaps surprising to note that these models differ significantly from one another. Although they may be useful as starting points, their differences tend to create confusion and anxiety among students. I would argue that these differences exist because the content and presentation of the "ideal" CV vary considerably among individual applicants, the stage of their careers, and the purposes for which the CV is used. It is impossible to create a generic CV. I have therefore not attempted to draw up another model CV. Rather, the purpose of this article is to outline the general principles and important practical points in preparing a good CV. General principles on contents Before finalising your CV for a particular purpose you must be sure of your objectives, whether it is used as an initial screening or the only selection instrument, and the criteria against which it is judged. What details, and how many of them, to include in your CV depends on these factors. I shall illustrate with examples relevant to medical students.&nbsp;<br /> <br /> (1) Job application Your objective is to get the job. In a job application, the CV is used for two purposes: as an initial screening instrument for shortlisting candidates and as a framework for discussion during the interview. The explicit criteria used for shortlisting are usually given in the job advertisement. For some organisations, separate lists of essential and desirable criteria are given. Alternatively, you can get a good idea of the basic requirements from the job description. Your CV must clearly highlight these criteria, preferably on the first page. These usually include: formal qualifications; registration with the General Medical Council; and the prescribed experience. It is sometimes easy to forget to mention items specifically asked for in the job description (for example, a valid driving licence). The implicit criteria are less easy to pinpoint. For example, how much detail on your BSc dissertation and publications should you include? Should you make a long list of extracurricular activities, interests outside medicine, and positions of responsibility? If you admit to a wide range of extracurricular activities and interests, would you be considered as a candidate with a well balanced mature personality or will it be interpreted to mean that you will have little time or interest to do your job? There are no easy answers. Common sense might tell you that BSc dissertation and publications are more important in application for teaching hospital or research posts, but less important for district hospital posts. Conversely, you might think that interests outside medicine are more important for posts in district hospitals or in general practice. This is, however, not always true. A few consultants at district hospital are highly academic. Information gathered from students and doctors working under the professor or consultant concerned may be vital. Alternatively, it is worth while doing your homework by looking up your prospective consultant in the medical directory. This may occasionally prompt you to include information that you might otherwise have left out. For example, you may find that the consultant qualified in Scotland and has previously worked in Scotland for a considerable time, and you may decide to add in your CV that you studied in a Scottish secondary school. Since the CV is only used as for initial screening, you need not go into your previous experience or extracurricular activities in too much detail. Highlight only the most significant points, and leave the details for the interview. If you are applying for a clinical post, one of your referees should be a consultant for whom you have worked as a student. You should ask for permission to use his/her name before submitting your application.&nbsp;<br /> <br /> (2) Application for research scholarship or PhD studentship The CV and application form are sometimes used as the sole selection instrument, and you must make enquiries before you submit your application. Clearly, academic ability is the main criterion for selection, and you should include as much information relevant to your academic ability and interests as you can. Examples are your A levels, your BSc dissertation, any publications (even in the form of a letter in newspaper), any experience as an editor (for example, for your school magazine). Your extracurricular activities are less important, and you can simply give a short list. At least one of the referees should be an academic - for example, your previous supervisor in your BSc degree.<br /> &nbsp;<br /> (3) Application to join a clinical course in another medical school Preclinical students who have completed an intercalated degree often have the option of applying to join a clinical course in another medical school, although it may become more difficult to do so with the introduction of the new GMC curriculum. Your CV is usually used for shortlisting candidates for interview. The criteria differ slightly among medical schools, but both academic ability and contribution to university life are important. Hence, not only should you highlight your academic achievements but you must also highlight your participation in the university (for example, in sports or music).&nbsp;<br /> <br /> (4) For the information of your tutor or counsellor For most medical schools, you are allocated a tutor who provides both academic and non-academic support and monitors your progress throughout your study on a confidential basis. Students are sometimes asked to submit their up to date CV to their tutors for information. Assuming that the tutors are helpful there is little to gain from over emphasising your strengths or hiding your weaknesses. Once you become a doctor in training after you qualify you will need to undergo an annual assessment of your progress. It serves to certify that you have reached a satisfactory standard, but it is also used as an aid to identify and help with your weaknesses. You may find it difficult to balance these two purposes in presenting your CV. General principles on presentation Now that all students are computer literate, there should be few problems in preparing a well presented CV. The following list serves as a reminder on how to present your CV effectively: Spelling or grammar mistakes - do not rely purely on the spell check on your computer. Ask friends to proofread your CV for you. Consistency - The use of punctuation to open and close sentences, justification, and fonts should be consistent. Readability - The headings should be clear. The font size should be no less than 12 point. Basic criteria - The basic criteria should be easily located, preferably on the first page. Length - The length of your CV increases as you progress up the professional ladder. For students, it should generally be no more than three pages. Quality of print - The CV should be printed on good quality paper, preferably using a laser printer. Practical points In this article, I argue that different versions of a CV may be required for different purposes. Even applications for different posts in the same specialty may require slightly different versions. Also, CVs need to be updated regularly. This would have been time consuming to achieve in the past, but it is now quite simple, with the aid of a basic word processing package. A master CV containing all relevant information should be prepared and saved as a computer file. This should be continuously kept up to date. When the need for a CV arises, it can be tailormade by editing the master document. It is important to save each of these edited versions separately, with the file names indicating the date when it was created and the purpose. It is also important to prepare a cover letter to go with the CV. Key messages A good CV is essential for successful progression up the medical professional ladder The contents of the CV should be tailormade for the purpose it is used for and the criteria against which it is judged. It is important to gather information about these criteria first The CV must be technically well presented, with the basic criteria easily located Information technology has made it simple to regularly update our CVs and allows preparation of different versions of a CV for different purposes with relative ease.</p><p><strong>Reference:</strong></p><p>Prepare a curriculum vitae. BMJ 1978;25(2):1478-9.<br /> O'Brien E. Prepare a curriculum vitae. In: Reece D, ed.&nbsp;<br /> How to do it. Vol 1. London: BMJ Publishing Group, 1995 Chambler AF, Chapman-Sheath PJ, Pearse MF.&nbsp;<br /> A model curriculum vitae: what are the trainers looking for? Hosp Med 1998;59(4):324-6.</p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/21365/a-guide-for-complete-r-beginners</guid>
	<pubDate>Fri, 20 Feb 2015 23:36:46 -0600</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/21365/a-guide-for-complete-r-beginners</link>
	<title><![CDATA[A guide for complete R beginners !]]></title>
	<description><![CDATA[<p>This tutorial is intended to introduce users quickly to the basics of R, focusing on a few common tasks that &nbsp;biologists need to perform &nbsp;some basic analysis: &nbsp;load a table, plot some graphs, and perform some basic statistics. More extensive tutorials can be found on the project website and via bioconductor (not covered here).</p><p><em><span style="text-decoration: underline;">R-language: </span></em><a href="http://www.r-project.org/"><span style="color: #000080;"><span style="text-decoration: underline;"><em>http://www.</em></span></span><span style="color: #000080;"><span style="text-decoration: underline;"><em><strong>r</strong></em></span></span><span style="color: #000080;"><span style="text-decoration: underline;"><em>-project.org</em></span></span></a></p><p><em>BioConductor</em>:&nbsp;<a href="http://www.bioconductor.org/">http://www.bioconductor.org</a></p><p><strong>Advantages of R</strong></p><ul>
<li>Free!</li>
<li>Powerful, many libraries have been created to perform application specific tasks. e.g. analysis of microarray experiments and Next-Gen sequencing (bioconductor: including Bioseq group).</li>
<li>Presentation quality graphics
<ul>
<li>Save as a png, pdf or svg</li>
</ul>
</li>
<li>History
<ul>
<li>What you do can be saved for the next time you use R.</li>
<li>Ability to turn it into an automated script to perform again and again on different data</li>
</ul>
</li>
</ul><p><strong>Disadvantages</strong></p><ul>
<li>Lack of a comprehensive graphical user interface, but two do exist: However some do exist:&nbsp;R commander: <a href="http://socserv.mcmaster.ca/jfox/Misc/Rcmdr/">http://socserv.mcmaster.ca/jfox/Misc/Rcmdr/</a> and&nbsp;Limma-gui (microarrays) : <a href="http://bioinf.wehi.edu.au/limmaGUI/">http://bioinf.wehi.edu.au/limmaGUI/</a></li>
</ul><p><strong>Preparation</strong></p><ul>
<li>(Optional) Download and save the tutorial data set from
<ul>
<li>http://bioinformatics.knowledgeblog.org/wp-content/uploads/bioinf/kerr/data.tsv</li>
<li>Start R (type R on a Linux or Mac terminal, or find the starting link from PC)</li>
</ul>
</li>
</ul><p><strong>Getting More Help</strong></p><ul>
<li>Project Home page
<ul>
<li><span style="color: #000080;"><span style="text-decoration: underline;"><a href="http://www.r-project.org/">http://www.r-project.org/</a></span></span></li>
<li>Check out the &lsquo;introduction to R&rsquo;, which is a much more in depth guide .</li>
<li>Also R has a built-in help system (see later)</li>
</ul>
</li>
</ul><p><strong>Working directory</strong></p><p>This is the directory used to store your data and results. It is useful if it is also the directory where your input data is stored.</p><ul>
<li>Mac/Linux: this is the directory where you typed in R</li>
<li>PC: Change using the change working directory option</li>
</ul>]]></description>
	<dc:creator>Archana Malhotra</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/22403/ryan-e-mills-lab</guid>
  <pubDate>Tue, 26 May 2015 09:29:24 -0500</pubDate>
  <link></link>
  <title><![CDATA[Ryan E. Mills Lab]]></title>
  <description><![CDATA[
<p>Our research group is primarily focused on the analysis of whole genome sequence data to identify genetic variation (primarily structural variation) and examine their potential functional impact in disease phenotypes. We are particularly interested in analyzing complex regions of the genome that are not easily resolved through modern sequencing approaches and which may exhibit interesting mechanistic origins.</p>

<p>We are also interested in the large-scale integration of genomic, expression, methylation and proteomic data sets, as well as the application of whole genome sequence analysis in clinical diagnostics. </p>

<p>More at http://millslab.ccmb.med.umich.edu/index.html</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/23149/raphael-lab</guid>
  <pubDate>Sat, 04 Jul 2015 19:05:29 -0500</pubDate>
  <link></link>
  <title><![CDATA[Raphael Lab]]></title>
  <description><![CDATA[
<p>Raphael Lab research is focused on Bioinformatics and Computational Biology.</p>

<p>Current research interests include next-generation DNA sequencing, structural variation, genome rearrangements in cancer and evolution, and network analysis of somatic mutations in cancer. Earlier research included topics in comparative genomics, multiple sequence alignment, and motif finding.</p>

<p>More athttp://compbio.cs.brown.edu/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/23633/biorg</guid>
  <pubDate>Tue, 04 Aug 2015 20:52:52 -0500</pubDate>
  <link></link>
  <title><![CDATA[BioRG]]></title>
  <description><![CDATA[
<p>This research group works on problems from the fields of Bioinformatics, Biotechnology, Data Mining, and Information Retrieval. The group's research projects includes Comparative Genomics of Bacterial genomes, Metagenomics, Genomic databases, Pattern Discovery in sequences and structures, micro-array data analysis, prediction of regulatory elements, primer design, probe design, phylogenetic analysis, medical image processing, image analysis, data integration, data mining, information retrieval, knowledge discovery in electronic medical records, and more. </p>

<p>More at http://biorg.cis.fiu.edu/</p>
]]></description>
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