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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/11144?offset=10</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/6562/molecular-bioinformatics-lab-mbl</guid>
  <pubDate>Tue, 19 Nov 2013 18:23:27 -0600</pubDate>
  <link></link>
  <title><![CDATA[Molecular Bioinformatics Lab (MBL)]]></title>
  <description><![CDATA[
<p>The main subject of interest in our laboratory is the study of the relationship among sequence, structure, and function in proteins and nucleic acids. Our research can be divided in two major topics:</p>

<p>the study of the sequence-structure relationship<br />(application -&gt; structure prediction)<br />the study of the structure-function relationship<br />(application -&gt; function prediction)</p>

<p>Therefore, anything related to the configuration (sequence) and conformation (structure) in atomic systems of proteins and nucleic acids, and the interaction of these with other elements (function) is of our major interest.</p>

<p>Lab page @ http://melolab.org/mbl/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/7088/gabi</guid>
  <pubDate>Fri, 06 Dec 2013 16:43:01 -0600</pubDate>
  <link></link>
  <title><![CDATA[GABi]]></title>
  <description><![CDATA[
<p>GABi Research<br />The major researching fields defined as the GABi scope are described next:<br />    Sequence Analysis<br />    Protein Structure Prediction<br />    Comparative Genomics<br />    Functional Analysis of Residues on Protein Families<br />    Gene/Protein Networks<br />    Genome structure &amp; base composition<br />    Highthroughput data analysis from NGS</p>

<p>Lab Page http://gabi.cidbio.org/index/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/7214/lapti-lab</guid>
  <pubDate>Thu, 12 Dec 2013 18:19:12 -0600</pubDate>
  <link></link>
  <title><![CDATA[LAPTI Lab]]></title>
  <description><![CDATA[
<p>The main theme of our research is the understanding of how genetic information is decoded from DNA into RNA and proteins. Someone may find this topic a little strange and argue that we already know how this is happening.</p>

<p>Translational recoding. </p>

<p>RNA editing. </p>

<p>Evolution of the genetic code and translation.</p>

<p>More at http://lapti.ucc.ie/research.html</p>

<p>Lab page http://lapti.ucc.ie/index.html</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/10391/research-associate-ra-at-iob</guid>
  <pubDate>Mon, 05 May 2014 08:38:54 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate (RA) at IOB]]></title>
  <description><![CDATA[
<p>Applications are invited for a post of Research Associate (RA) or Senior Research Fellow (SRF) in the ICMR project on "Integrated Analysis of Multi-omics Data in Human Gliomas".</p>

<p>We are looking for a motivated candidate for handling proteomic and/or transcriptomic and other data with a strong background in bioinformatics tools and database development. The project will include identification of novel peptides from mass spectrometry-based proteomic data.</p>

<p>Familiarity with statistical tools or wet lab experience will be an added advantage. The position is open for immediate appointment and available for two years. The applicant will be appointed as Research Associate or Senior Research Fellow based on qualifications as detailed below:</p>

<p>Research Associate: Ph.D. in Biological Science or Bioinformatics with relevant publications in peer reviewed journals. Familiarity with bioinformatics tools, database development, programming skills and proteomic and/or other omics data analysis. Salary will be as per ICMR rules and guidelines.</p>

<p>Senior Research Fellow: M.Sc./B.Tech. in any branch of biology/ biotechnology/bioinformatics, with minimum 2 years of research experience (essential). Familiarity with bioinformatics tools, database development, programming skills and proteomic data analysis. Salary will be as per ICMR rules and guidelines.</p>

<p>Application will be shortlisted based on CV, reference letters from mentors and telephonic interview. Candidates will be called for a personal interview at Bangalore before appointment. No travel expense will be provided for attending interview at Bangalore.</p>

<p>Interested candidates may send a Letter of Interest and CV by email to: ravi@ibioinformatics.org on or before May 15th, 2014.</p>

<p>Contact:<br />Dr. Ravi Sirdeshmukh<br />Distinguished Scientist &amp; Associate Director, IOB,<br />Principal Advisor MSMC/MSCTR</p>

<p>Advertisement: www.ibioinformatics.org/careers.php</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/10260/%E2%80%9Con%E2%80%9D-and-%E2%80%9Coff%E2%80%9D-the-neuron</guid>
	<pubDate>Fri, 25 Apr 2014 19:31:13 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/10260/%E2%80%9Con%E2%80%9D-and-%E2%80%9Coff%E2%80%9D-the-neuron</link>
	<title><![CDATA[“On” and “Off” the neuron !!!]]></title>
	<description><![CDATA[<p><span>Optogenetics is a recent innovation in neuroscience that gives researchers the ability to control the activity of neurons with light. With this powerful tool, researchers are teasing apart the biological basis of memory, behavior, and disease (see &ldquo;<a href="http://www.technologyreview.com/news/517226/scientists-make-mice-remember-things-that-didnt-happen/"><span>Scientists Make Mice &lsquo;Remember&rsquo; Things That Didn&rsquo;t Happen</span></a>&rdquo; and &ldquo;<a href="http://www.technologyreview.com/news/423254/an-on-off-switch-for-anxiety/"><span>An On-Off Switch for Anxiety</span></a>,&rdquo;). But for the first several years of this technology&rsquo;s existence, the proteins that scientists added to neurons to make them react to light were only good at activating neurons. That limited researchers&rsquo; ability to understand neuronal circuits, sets of interconnected neurons that are thought to control behavior and, when misfiring, to underlie many brain conditions. Problems can arise from any imbalance in circuit activity, whether too much or too little.&nbsp;</span></p><p><span>Now, two research groups have engineered new optogenetic proteins that can be used to efficiently silence neurons.&nbsp;<span><span>One of the two new proteins comes from the lab of<span>&nbsp;</span><a href="http://www.stanford.edu/group/dlab/about_pi.html" target="_blank">Karl Deisseroth</a>, a psychiatrist and neuroscientist at Stanford University who helped develop optogenetics as a research tool.&nbsp;His group&rsquo;s new &ldquo;off&rdquo; switch for neurons was created by changing 10 of the 333 amino acids in an existing optogenetic protein, which itself had been engineered by combining natural proteins from<span>&nbsp;</span></span></span><a href="http://genome.jgi-psf.org/Chlre3/Chlre3.home.html" target="_blank"><span>green algae</span></a><span><span>. That advance&nbsp;</span><span>&ldquo;creates a powerful tool that allows neuroscientists to apply a brake in any specific circuit with millisecond precision,&rdquo; said Thomas&nbsp;Insel, director of the National Institute of Mental Health, in a released statement.&nbsp;</span><a href="http://www.sciencemag.org/content/344/6182/409" target="_blank"><span>The other new silencing protein</span></a>, developed by scientists at the H</span><span>umboldt University of Berlin and collaborators, was created by changing amino acids in the same existing optogenetic protein.&nbsp;</span></span></p><p><span><span>Some researchers are also looking to optogenetics as a potential treatment for patients with a variety of conditions (see &ldquo;</span></span><span><a href="http://www.technologyreview.com/news/524771/for-mice-and-maybe-men-pain-is-gone-in-a-flash/"><span>For Mice, and Maybe Men, Pain Is Gone in a Flash</span></a><span><span>,&rdquo; and &ldquo;</span></span><a href="http://www.technologyreview.com/news/506981/flipping-on-the-lights-to-halt-seizures/"><span>Flipping on the Lights to Halt Seizures</span></a><span><span>&rdquo;) but there are huge challenges to overcome. The method requires genetic modification of cells to make them light-sensitive. It also requires implanted light sources for all but the shallowest of nerve endings. <br /></span></span></span></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/19087/dcgor</guid>
	<pubDate>Sat, 08 Nov 2014 14:54:28 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/19087/dcgor</link>
	<title><![CDATA[dcGOR]]></title>
	<description><![CDATA[<p>An R package for analysing ontologies and protein domain annotations has been published in PLoS Computational Biology (http://dx.doi.org/10.1371/journal.pcbi.1003929). The package is distributed as part of CRAN (http://cran.r-project.org/package=dcGOR), and also at GitHub for version control.<br /><br />The dedicated website is available in http://supfam.org/dcGOR, from which several demos are also provided:<br /><br />1. Analysing SCOP domains: http://supfam.org/dcGOR/demo-Fang.html<br /><br />2. Analysing Pfam domains: http://supfam.org/dcGOR/demo-Basu.html<br /><br />3. Analysing InterPro domains: http://supfam.org/dcGOR/demo-Customisation.html<br /><br />&nbsp;</p>]]></description>
	<dc:creator>Martin Jones</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/26828/bioinfolab</guid>
  <pubDate>Fri, 25 Mar 2016 11:05:35 -0500</pubDate>
  <link></link>
  <title><![CDATA[BioinfoLab]]></title>
  <description><![CDATA[
<p>Laboratory of Statistics and Computational tools for Bioinformatics</p>

<p>The Laboratory of Statistics and Computational tools for Bioinformatics (BioinfoLab) is hosted at the Istituto per le Applicazioni del Calcolo "Mauro Picone" - CNR . The laboratory has been officially opened in 2012 with the support of Programma Operativo Nazionale "Ricerca e Competitività" 2007-2013 (PON "R&amp;C"), and it incorporates several expertise and research activities started since 2007, and supported by several CNR projects. Main interest of BioinfoLab is to develop novel statistical methods and computational tools for the analysis of high dimensional data arising from "Multi-omics" applications. In particular, current activities involve the analysis of ChIP-seq and RNA-seq experiments. </p>

<p>More at http://bioinfo.na.iac.cnr.it/BioinfoLab/index.html</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26250/research-fellow-bioinformatics-at-central-university-of-rajasthan</guid>
  <pubDate>Tue, 02 Feb 2016 00:04:50 -0600</pubDate>
  <link></link>
  <title><![CDATA[Research Fellow Bioinformatics at Central University of Rajasthan]]></title>
  <description><![CDATA[
<p>Research Fellow Bioinformatics</p>

<p>Eligibility : MSc(Bio-Chemistry, Bio-Informatics, Bio-Tech)<br />Location : Ajmer<br />Last Date : 13 Feb 2016<br />Hiring Process : Face to Face Interview<br />Central University of Rajasthan</p>

<p>Research Fellow Job vacancies in Central University of Rajasthan</p>

<p>Project Title : “Development of natural product derived febrifugine ananlogues as a novel therapeutics against visceral leishmaniasis”</p>

<p>No. of Post : 01</p>

<p>Qualification : Master of Biochemistry, Biotechnology, Bioinformatics and related biological sciences with minimum 55%, Age limit as per government rule.</p>

<p>Desirable Experience : Candidates with experience in cell culture, Chemoinformatics, and Parasitology will be preferred.    </p>

<p>Fellowship : Rs. 25,000/- p.m. consolidated for NET qualified (14,000/- p.m. consolidated for Non-NET)<br />How to apply</p>

<p>The candidates may apply on a plain paper, along with their curriculum vitae (including name, date of birth, academic qualification starting from 10th class, summary of research experience, email id, phone number and passport size photograph) and email to vkprajapati@curaj.ac.in or post the hard copy to the Dr. Vijay Kumar Prajapati PI, DST-SERB Project (YSS/2015/000716), Department of Biochemistry, School of Life Sciences, Central University of Rajasthan, Bandarsindri, Dist- Ajmer, Rajasthan, 305 817 on or before 13th February 2016.</p>

<p>More at http://www.curaj.ac.in/Default.aspx?PageId=241</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26319/n50plottingtools</guid>
	<pubDate>Mon, 08 Feb 2016 15:39:04 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26319/n50plottingtools</link>
	<title><![CDATA[n50PlottingTools]]></title>
	<description><![CDATA[<p><span>Tools to create plots showing N-statistics for genome assemblies </span></p>
<p><span>More at https://github.com/dentearl/n50PlottingTools</span></p><p>Address of the bookmark: <a href="https://github.com/dentearl/n50PlottingTools" rel="nofollow">https://github.com/dentearl/n50PlottingTools</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26537/destruct</guid>
	<pubDate>Mon, 29 Feb 2016 17:34:59 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26537/destruct</link>
	<title><![CDATA[destruct]]></title>
	<description><![CDATA[<p>Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples.</p>
<p>More at&nbsp;https://bitbucket.org/dranew/destruct</p><p>Address of the bookmark: <a href="https://bitbucket.org/dranew/destruct" rel="nofollow">https://bitbucket.org/dranew/destruct</a></p>]]></description>
	<dc:creator>Jitendra Prajapati</dc:creator>
</item>

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