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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/11355?offset=1410</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/2882/phylogenetics</guid>
	<pubDate>Fri, 23 Aug 2013 03:53:43 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/2882/phylogenetics</link>
	<title><![CDATA[Phylogenetics]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/fQwI90bkJl4" frameborder="0" allowfullscreen></iframe>006 - Phylogenetics

Paul Andersen discusses the specifics of phylogenetics.  The evolutionary relationships of organisms are discovered through both morphological and molecular data.  A specific type of phylogenetic tree, the cladogram, is also covered.

Intro Music Atribution
Title: I4dsong_loop_main.wav
Artist: CosmicD
Link to sound: http://www.freesound.org/people/CosmicD/sounds/72556/
Creative Commons Atribution License]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/6027/sharing-a-million-genomes-yves-moreau-at-tedxbrussels</guid>
	<pubDate>Sun, 03 Nov 2013 19:04:25 -0600</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/6027/sharing-a-million-genomes-yves-moreau-at-tedxbrussels</link>
	<title><![CDATA[Sharing a million genomes: Yves Moreau at TEDxbrussels]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/uYfyW7c23y4" frameborder="0" allowfullscreen></iframe>In the spirit of ideas worth spreading, TEDx is a program of local, self-organized events that bring people together to share a TED-like experience. At a TEDx event, TEDTalks video and live speakers combine to spark deep discussion and connection in a small group. These local, self-organized events are branded TEDx, where x = independently organized TED event. The TED Conference provides general guidance for the TEDx program, but individual TEDx events are self-organized.* (*Subject to certain rules and regulations)]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/8175/the-future-of-personalized-medicine</guid>
	<pubDate>Thu, 06 Feb 2014 00:21:26 -0600</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/8175/the-future-of-personalized-medicine</link>
	<title><![CDATA[The Future of Personalized Medicine]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/WUQ_qVe9HGQ" frameborder="0" allowfullscreen></iframe>Howard Jacob speaking on Personalize Medicine at the Illumina Meeting in Feb. of 2013.]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/33903/visiting-scientist-computational-genomics</guid>
  <pubDate>Mon, 17 Jul 2017 07:20:18 -0500</pubDate>
  <link></link>
  <title><![CDATA[Visiting Scientist - Computational Genomics]]></title>
  <description><![CDATA[
<p>ICRISAT is a non-profit, non-political organization that conducts agricultural research for development in Asia and sub-Saharan Africa with a wide array of partners throughout the world. ICRISAT and its partners help empower those living in the semi-arid tropics, especially smallholder farmers, to overcome poverty, hunger, malnutrition and a degraded environment through more efficient and profitable agriculture. </p>

<p>ICRISAT is headquartered in Patancheru near Hyderabad, India, with two regional hubs and five country offices in sub-Saharan Africa. ICRISAT, established in 1972, is a member of the CGIAR Consortium. For more details, see www.icrisat.org.</p>

<p>Job Responsibilities:<br />Planning and execution of different NGS/genomics data analysis<br />Apply, maintain, and support cutting-edge pipelines for the analysis and interpretation of NGS data<br />Analyze large-scale genomic datasets generated internally and through collaboration with others<br />Genome wide analysis- LD analysis, hapmap, genetic map construction and qtl mapping<br />Expression analysis based on RNA-seq, gene ontology and metabolic pathway data<br />Sequence level analysis like gene family analysis, orthology/paralogy etc.<br />Familiarity with genomic and biological information databases<br />Compilation and interpretation of results and writing reports<br />Experience working independently and in a team environment<br />Requirements:</p>

<p>PhD or M.Sc with 2-3 years experience from reputed institute in the area of life science or similar Knowledge in Next Generation Sequencing (NGS) data analysis. Should be familiar with various sequencing platforms. Sound knowledge of genomics and molecular biology is must. Proficient in any one of the programming/scripting in languages: Python, Perl, PHP, R, Shell Scripting. Must be experienced in working on Linux and CLI environment. Ability to work as team as well as independently with minimal support. Fluency in spoken and written English is essential. </p>

<p>NGS techniques like sequence alignment, variant calling based on whole genome re-sequencing and genotyping-by-sequencing (GBS), RNA-Seq/transcriptome analysis<br />Knowledge of various standard NGS related tool<br />Ability to solve complex problems in advanced genomics research areas<br />Ease and interest in working with people from diverse backgrounds<br />Excellent oral/written communication and interpersonal/networking skills<br />General: <br />This position is contract for a period of two years.</p>

<p>How to apply:<br />Applicants should apply on or before 27-July-2017, with latest Curriculum Vitae, and the names and contact information of three references that are knowledgeable about your professional qualifications and work experience. All applications will be acknowledged, however only short listed candidates will be contacted<br />Please CLICK HERE to submit your application. <br />ICRISAT is an equal opportunity employer</p>

<p>http://icrisat.careersitemanager.com/job-listings-Visiting-Scientist-Computational-Genomics-ICRISAT-Hyderabad-Secunderabad-2-to-4-years-060717000278</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/11592/xampp-starting-apache-fail-ubuntu</guid>
	<pubDate>Sat, 07 Jun 2014 05:52:35 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/11592/xampp-starting-apache-fail-ubuntu</link>
	<title><![CDATA[XAMPP: Starting Apache fail Ubuntu]]></title>
	<description><![CDATA[<p>Once you install XAMMP on linux, the most common problem you face is Apache failure. To fix the issues please use following command to first stop and then again start it.</p><p>sudo /etc/init.d/apache2 stop</p><p>sudo /etc/init.d/mysql stop</p><p>sudo /etc/init.d/proftpd stop</p><p>sudo /opt/lampp/lampp start</p><p>&nbsp;</p><p><strong>PhpMyAdmin &ldquo;Wrong permissions on configuration file, should not be world writable!&rdquo;</strong></p><p>Once the Xammp is installed, it might be possible to set up the configuration file in writable mode. Try the following steps:</p><p>Just chmod 0755 the file</p><pre>sudo chmod 0755 config.inc.php</pre>]]></description>
	<dc:creator>Ram Yash Pal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/34624/teacheng-teaching-engine-for-genomics</guid>
	<pubDate>Wed, 13 Dec 2017 17:55:23 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/34624/teacheng-teaching-engine-for-genomics</link>
	<title><![CDATA[TeachEnG: Teaching Engine for Genomics]]></title>
	<description><![CDATA[<p>TeachEnG (pronounced &ldquo;teaching&rdquo;), a <span style="text-decoration: underline;">Teach</span>ing <span style="text-decoration: underline;">En</span>gine for <span style="text-decoration: underline;">G</span>enomics, provides educational games to help students and researchers understand key bioinformatics concepts. The current version includes interactive modules for sequence alignment and phylogenetic tree reconstruction algorithms, with accompanying video tutorials. <br><br> Please contact us via email (knoweng@illinois.edu) if you have any questions or suggestions.&nbsp;</p><p>Address of the bookmark: <a href="http://teacheng.illinois.edu/" rel="nofollow">http://teacheng.illinois.edu/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/37248/postdoctoral-research-assistant-at-rvc</guid>
  <pubDate>Mon, 09 Jul 2018 00:47:38 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Research Assistant at RVC]]></title>
  <description><![CDATA[
<p>This is a fixed term post for 24 months.</p>

<p>We wish to recruit a highly motivated, postdoctoral scientist to carry out a BBSRC funded project in the laboratory of Dr. Denis Larkin. The project is focused on developing and applying new methods and algorithms to study genome and chromosome evolution in mammals and other animals using whole-genome sequences and existing algorithms (e.g., Damas et al. Genome Res. 2017. 27(5):875-884; Kim et al., Proc Natl Acad Sci USA. 2013. 110 (5)). The post holder will use cutting edge computational and laboratory approaches to generate chromosomal assemblies for sequenced genomes, study chromosomal structures and differences between mammalian and other vertebrate genomes in attempt to identify species- and clade-specific genome signatures.</p>

<p>Applicants must have a Ph.D. and a track record of success, as indicated by first-author publications in international journals. They must possess excellent organisation skills and be capable of individual initiative and of interacting as part of a team. Applicants with extensive practical experience in bioinformatics or computer science, programming, visualization, handling of large data sets, high-performance computing are encouraged to apply. The post will involve collaboration with a wide range of academic partners both within the EU and worldwide.</p>

<p>Experience in programming, bioinformatics and comparative genome analysis is essential. Applicants should have a minimum of a degree and preferably a higher degree in a relevant subject.</p>

<p>The Royal Veterinary College has the largest range of veterinary, para-veterinary and animal science undergraduate and postgraduate courses of any veterinary school in the world and is one of the largest veterinary schools in Europe.</p>

<p>Prospective applicants are encouraged to contact Dr. Denis Larkin, Comparative Biomedical Sciences Department on +442071211906 or email: dlarkin@rvc.ac.uk</p>

<p>We offer a generous reward package.</p>

<p>For further information and to apply on-line please visit our website: www.rvc.ac.uk<br />Job reference CBS-0084-18</p>

<p>https://jobs.rvc.ac.uk/Vacancy.aspx?ref=CBS-0084-18</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/42324/comparative-genomics-data-set-including-240-mammals-released</guid>
	<pubDate>Thu, 19 Nov 2020 06:45:39 -0600</pubDate>
	<link>https://bioinformaticsonline.com/news/view/42324/comparative-genomics-data-set-including-240-mammals-released</link>
	<title><![CDATA[Comparative Genomics Data Set Including 240 Mammals Released !]]></title>
	<description><![CDATA[<p>The genome of 130 mammals was sequenced by a large international consortium and the data was analyzed together with 110 existing genomes to allow scientists to identify the important positions in the DNA. This report, published in Nature today will help advance research on human disease mutations and inform how best to protect endangered species.</p><p>In addition to the knowledge of the human genome, all these genomes, widely sampled across mammals, can be used to research how particular organisms respond to different conditions. Some otters, for example, have a thick, water-resistant shell, and some rodents, but not all, have adapted to hibernation. These animal traits will help us to understand human traits, such as metabolic diseases.</p><p><img src="https://media.springernature.com/lw685/springer-static/image/art%3A10.1038%2Fs41586-020-2876-6/MediaObjects/41586_2020_2876_Fig1_HTML.png?as=webp" alt="image" style="border: 0px; border: 0px;"></p><p>With climate change and more animal ecosystems being threatened by human activity, the protection of endangered species is becoming increasingly important. Scientists have historically researched several people in various populations of a species to understand the genetic variation that occurs in that species. This is important for understanding how particular species can be protected. In this study, animals on the Red List of Endangered Species of the International Union for Conservation of Nature had fewer differences in their genomes, which is consistent with their endangered status.</p><p>Ref @&nbsp;A comparative genomics multitool for scientific discovery and conservation&nbsp;https://www.nature.com/articles/s41586-020-2876-6</p><p>&nbsp;Data at&nbsp;http://zoonomiaproject.org/</p>]]></description>
	<dc:creator>Jit</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/42903/katherine-belov-lab</guid>
  <pubDate>Sun, 21 Feb 2021 22:59:35 -0600</pubDate>
  <link></link>
  <title><![CDATA[Katherine Belov Lab]]></title>
  <description><![CDATA[
<p>Evolution of the adaptive immune system Marsupial and monotreme immune genes MHC Diversity and Conservation Marsupial and monotreme genomics Comparative Genomics Genetics of Tasmanian Devil facial tumour disease</p>

<p>More at https://www.sydney.edu.au/science/about/our-people/academic-staff/kathy-belov.html</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/44395/genomics-india-conference-2024</guid>
  <pubDate>Fri, 27 Oct 2023 05:48:11 -0500</pubDate>
  <link></link>
  <title><![CDATA[Genomics India Conference 2024 !]]></title>
  <description><![CDATA[
<p>Genomics India Conference is back and this time we are coming to Shiv<br />Nadar Intitution of Eminenece, Delhi NCR. GIC 2024 will be held from 1st<br />to 3rd of February 2024 and we are happy to send you an early invitation<br />for India's premier genomics conference.</p>

<p>GIC2024 focuses on "Advances In Genomics From AI-ML To Targeted<br />Therapies". GIC2024 encourages researchers to present original<br />contributions for poster presentations.</p>

<p>Note: Early bird registration closes on 1st December 2023.</p>

<p>Kindly, register at GIC 2024 Earlybird registartion</p>

<p>https://genomicsindia.co.in/</p>
]]></description>
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