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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/12206?offset=850</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/22414/x-shirley-liu-lab</guid>
  <pubDate>Tue, 26 May 2015 17:28:23 -0500</pubDate>
  <link></link>
  <title><![CDATA[X. Shirley Liu Lab]]></title>
  <description><![CDATA[
<p>The research in our laboratories are focused on the following three areas: </p>

<p>Bioinformatics<br />Cancer<br />Epigenetics</p>

<p>More at http://liulab.dfci.harvard.edu/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24462/icar-project-ra-position-institute-of-bioinformatics-iob-bangalore</guid>
  <pubDate>Tue, 22 Sep 2015 23:41:31 -0500</pubDate>
  <link></link>
  <title><![CDATA[ICAR project RA position @ Institute of Bioinformatics (IOB) Bangalore]]></title>
  <description><![CDATA[
<p>Applications are invited for the post of Research Associate (RA) in the ICAR project on "Lactation stress associated postpartum anestrus SNP array in buffaloes". We are looking for a motivated candidate for handling Next Generation sequencing data analysis with a strong background in bioinformatics and programming.</p>

<p>The position is open for immediate appointment and available for two years and then extendable for additional one year. The applicant will be appointed as Research Associate based on qualifications as detailed below:</p>

<p>Research Associate:</p>

<p>-Master’s degree with bioinformatics with at least 2 years of research experience in Next Generation sequencing data analysis as evidence from Fellowship/ Associateship / Training / other engagements.</p>

<p>-Familiarity with bioinformatics tools, database development, programming skills</p>

<p>-Minimum 1 publication in any peer reviewed journal</p>

<p>Salary will be as per ICAR rules and guidelines. Application will be shortlisted based on CV, reference letters from mentors and telephonic interview. Candidates will be called for a personal interview at Bangalore before appointment. No travel expense will be provided for attending interview at Bangalore.</p>

<p>Interested candidates may send a Letter of Interest and CV by email to: keshav@ibioinformatics.org before September 29, 2015.</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24463/project-fellow-at-indian-institute-of-chemical-biology-iicb</guid>
  <pubDate>Tue, 22 Sep 2015 23:47:35 -0500</pubDate>
  <link></link>
  <title><![CDATA[Project Fellow at Indian Institute of Chemical Biology (IICB)]]></title>
  <description><![CDATA[
<p>Advertisement No. : R&amp;C/CD/427/2015  ,Vacancy Code: 4271501    </p>

<p>Project Fellow Bioinformatics recruitment in Indian Institute of Chemical Biology (IICB) purely temporary </p>

<p>Name of the Project:  "Genomics and Informatics Solutions for Integrating Biology(Genesis)".     </p>

<p>No. of Vacancies: 1     </p>

<p>Qualification required : M.Sc in Bioinformatics with 55% Marks. </p>

<p>Experience (Desirable): Candidate should be well versed with sequencing data analysis,assembly and annotation of whole genome sequence. Experience in transcriptional data analysis is also preferred.</p>

<p>Age Limit : 28 Years   <br />  <br />Stipend : Rs.16000<br />How to apply<br />Interested candidates may appear for the walk-in-interview to be held on 28.09.2015 from 11.00 a.m. in the Red Carpet Room with the following documents self attested copy - (1) Matriculation Certificate in support of your date of birth, (2) Degree/Diploma Certificate, (3) Original reprints of all testimonials regarding educational qualification, (4) No Objection Certificate from the employer if employed, (5) Final Mark Sheet of M.Sc. Examination, (6) One Passport size photograph.</p>

<p>http://www.career.iicb.res.in/Recruitment%20Notice.php</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26587/last</guid>
	<pubDate>Wed, 09 Mar 2016 14:27:01 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26587/last</link>
	<title><![CDATA[LAST]]></title>
	<description><![CDATA[<p style="text-align: center;"><img src="http://last.cbrc.jp/lastwebfig.png" alt="sketch of  similar regions in sequences" style="border: 0px;"></p>
<p>LAST can:</p>
<ul>
<li>Handle <strong>big</strong> sequence data, e.g:
<ul>
<li>Compare two vertebrate genomes</li>
<li>Align billions of DNA reads to a genome</li>
</ul>
</li>
<li>Indicate the <a href="http://lastweb.cbrc.jp/about.html">reliability</a> of each aligned column.</li>
<li>Use sequence quality data <a href="http://nar.oxfordjournals.org/content/38/7/e100.abstract">properly</a>.</li>
<li>Compare DNA to proteins, with frameshifts.</li>
<li>Compare PSSMs to sequences</li>
<li>Calculate the likelihood of chance similarities between random sequences.</li>
<li>Do split and spliced alignment.</li>
<li><a href="http://last.cbrc.jp/doc/last-train.html">Train</a> alignment parameters for unusual kinds of sequence (e.g. nanopore).</li>
</ul><p>Address of the bookmark: <a href="http://last.cbrc.jp/" rel="nofollow">http://last.cbrc.jp/</a></p>]]></description>
	<dc:creator>Archana Malhotra</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/25770/fellowship-doctoral-research-in-biomedical-genomics-including-statistical-genomics</guid>
  <pubDate>Sun, 20 Dec 2015 06:03:43 -0600</pubDate>
  <link></link>
  <title><![CDATA[Fellowship (Doctoral Research In Biomedical Genomics, Including Statistical Genomics)]]></title>
  <description><![CDATA[
<p>Fellowship (Doctoral Research In Biomedical Genomics, Including Statistical Genomics)<br />Eligibility : MSc(Bio-Chemistry, Bio-Informatics, Bio-Tech, Mathematics / Applied Mathematics, Stati, Zoology)<br />Location : Kolkata<br />Last Date : 31 Dec 2015<br />Hiring Process : Written-test</p>

<p>NO: 340/ESTB/ADMN/NIBMG/2015-16 <br />Doctoral Research In Biomedical Genomics, Including Statistical Genomics conduct National Institute of Biomedical Genomics (NIBMG)<br />Information For Students Interested To Pursue Doctoral Research In Biomedical Genomics, Including Statistical Genomics, At The National Institute Of Biomedical Genomics (Nibmg), Kalyan<br />Eligibility conditions for specific areas of research are :<br />Statistical Genomics : An applicant who wishes to pursue research in Statistical Genomics should hold a Master's degree (First class or equivalent) in a relevant discipline (Statistics, Mathematics, Bioinformatics, or a related discipline)<br />Biomedical Genomics : An applicant who wishes to pursue research in any area of biomedical genomics, other than statistical genomics, should hold a Master's degree (First class or equivalent) in a relevant discipline (Biochemistry, Biotechnology, Molecular Biology, Genetics, Zoology, Physiology, or a related discipline)<br />Fellowship : An applicant should have passed the NET conducted by CSIR/UGC/ICMR/DBT within the past ONE year AND should have been awarded a valid Junior Research Fellowship from CSIR, UGC, ICMR, DBT (Category-I only), DST (INSPIRE), NBHM. Preference will be given to candidates with demonstrable research training in the form of summer training or short-term courses in established research laboratories in preparation for a research career in biomedical sciences<br />How to apply<br />Online application will be accepted until 5 PM of December 31, 2015. A formal interview of the short-listed candidates will be held on January 12, 2016</p>

<p>More at http://www.nibmg.ac.in/?q=Career%20Opportunities</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26567/ra-at-university-of-pune</guid>
  <pubDate>Mon, 07 Mar 2016 03:48:33 -0600</pubDate>
  <link></link>
  <title><![CDATA[RA at University of Pune]]></title>
  <description><![CDATA[
<p>Research Associate Job vacancies in University of Pune on temporary basis</p>

<p>No. of Post : 01</p>

<p>Department : Science and Technology</p>

<p>Qualifications : Ph.D. with specialization in Bioinformatics/Machine Learning/ Mathematical Biology/ Computational Biology/ Systems Biology with a minimum of 55% marks in M. Sc. (50% for candidates belongs to reserved category) or equivalent grade.  Candidates who have submitted their Ph.D. thesis and are waiting for award of Ph.D. are also eligible. OR M. Sc. Bioinformatics with two years of research experience in the areas mentioned above, a minimum of 55% marks in M.Sc. (50% for candidates belongs to reserved categories) or equivalent grade and at least one publication in Science Citation Index (SCI) journal. Preference will be given to B.I.N.C. /J.R.F. /N.E.T. /S.E.T. qualified candidates.  </p>

<p>Emoluments : Rs. 20,000/- (Including H.R.A.) per month.<br />How to apply</p>

<p>The complete application along with necessary documents and certificates should reach to 'The Director, Bioinformatics Centre, Savitribai Phule Pune University (Formerly University of Pune), Caneshkhind Road. Pune - 411 007 on or before 21st March, 2016 within official hours except Sundays (i.e. 10.20 am to 06.00 pm).</p>

<p>More at http://collegecirculars.unipune.ac.in/sites/documents/Job%20Openings/Forms/AllItems.aspx</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26336/project-fellow-bioinformatics-at-central-university-of-himachal-pradesh</guid>
  <pubDate>Tue, 09 Feb 2016 03:58:00 -0600</pubDate>
  <link></link>
  <title><![CDATA[Project Fellow Bioinformatics at Central University of Himachal Pradesh]]></title>
  <description><![CDATA[
<p>Project Fellow Bioinformatics</p>

<p>Eligibility : MSc(Bio-Chemistry, Bio-Informatics)</p>

<p>Location : Kulu</p>

<p>Last Date : 07 Mar 2016</p>

<p>Hiring Process : Face to Face Interview<br />Central University of Himachal Pradesh</p>

<p>Project Fellow Bioinformatics Job in Central University of Himachal Pradesh</p>

<p>Project (MRP) entitled: “A project proposal on targeting novel prokaryotic ubiquitin like post-translational modification pathway for therapeutic interventions against Mycobacterium tuberculosis” (No. MRP-MAJOR-MICR-2013-26840)</p>

<p>Essential Qualification: 1. Master degree in Bioinformatics/Biochemistry/Biotechnology/Environmental Science/Microbiology or any branch of Life Sciences with a minimum of 55% marks for general category (50% in case of SC/ST/PH) 2. UGC/CSIR NET, GATE qualified candidates will be given preference. Desirable Qualification: Experience in basic Bioinformatics and Molecular Biology techniques.</p>

<p>Age: Below 40 years as on 01/10/2015.</p>

<p>No.of Post: 1</p>

<p>Salary: NET/GATE qualified candidate: Rs. 16,000/-p.m. for initial two years and Rs. 18,000/- p.m. for the third year. Non-NET/GATE candidates: Rs. 14,000/-p.m. for initial two years and Rs. 16,000/-p.m. for the third year.</p>

<p>Mode of Selection: The selection shall be made on the basis of merit. The eligible candidates are required to appear for interview before the duly constituted Selection Committee for the purpose. The scheduled date, time and venue for the interview shall be intimated to the eligible candidates through phone/ e-mail.<br />How to apply</p>

<p>Last date for the receipt of applications is 07.03.2016. </p>

<p>More at http://www.cuhimachal.ac.in/news_all.aspx</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26378/centurion</guid>
	<pubDate>Fri, 12 Feb 2016 04:45:41 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26378/centurion</link>
	<title><![CDATA[Centurion]]></title>
	<description><![CDATA[<p>Although centromeres are essential for life and are the subject of extensive research, centromere locations in yeast genomes are difficult to infer, and in most species they are still unknown. Recently, the chromatin conformation assay Hi-C has been re-purposed for diverse applications, including de novo genome assembly, deconvolution of metagenomic samples, and inference of centromere locations. We describe a method, Centurion, that jointly infers the locations of all centromeres in a single yeast genome by exploiting the centromeres&rsquo; tendency to cluster in 3D space. We first demonstrate the accuracy of Centurion in identifying known centromere locations from high coverage Hi-C data of budding yeast and a human malaria parasite. We then use two metagenomic samples with relatively low coverage Hi-C data to infer centromere locations for each chromosome in 14 different yeast species. For yeasts with large centromeres (e.g., S. pombe) Centurion predicts the exact centromere locations. For seven yeasts with point centromeres, Centurion predicts most of the centromeres at an average of 5~kb distance from their known locations. Finally, we predict centromere coordinates for six yeast species that currently lack centromere annotations. These results suggest that Centurion can be used for centromere identification for a large number of yeast species, even with a limited amount of Hi-C sequencing.</p>
<p>Paper:http://www.ncbi.nlm.nih.gov/pubmed/25940625</p>
<p>More at http://cbio.ensmp.fr/centurion/</p><p>Address of the bookmark: <a href="http://cbio.ensmp.fr/centurion/" rel="nofollow">http://cbio.ensmp.fr/centurion/</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/26391/radka-reifova-lab</guid>
  <pubDate>Mon, 15 Feb 2016 06:00:48 -0600</pubDate>
  <link></link>
  <title><![CDATA[Radka Reifová Lab]]></title>
  <description><![CDATA[
<p>We are generally interested in the mechanisms of species origin from a molecular and ecological perspective. Particularly, we are interested in the role of sex chromosomes in speciation. Most of our research is done on birds and mammals. Currently, we focus our research on two hybridizing song birds, the Common nightingale (Luscinia megarhynchos) and the Thrush Nightingale (L. luscinia). Combining population genomic and ecological approaches we try to elucidate the genetic architecture of reproductive isolation and understand the role of interspecific competition and song convergence in the evolution of reproductive isolation between the species. </p>

<p>More at http://web.natur.cuni.cz/~radkas/index.php?page=research</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/26554/ra-at-north-eastern-hill-university</guid>
  <pubDate>Wed, 02 Mar 2016 08:27:32 -0600</pubDate>
  <link></link>
  <title><![CDATA[RA at North-Eastern Hill University]]></title>
  <description><![CDATA[
<p>North-Eastern Hill University</p>

<p>Umshing, Shillong- 793 022</p>

<p>Applications are invited for the following positions (purely temporary posts) in an UGC-ISF funded Indo-Israel Joint Research Project entitled “Interactions of mRNA export factors and nuclear pores characterized and quantified by biochemistry, biophysics and high-resolution imaging” sanctioned to Dr. Timir Tripathi, Molecular and Structural Biophysics Laboratory, Department of Biochemistry, NEHU, Shillong for 3 years (2016-19).</p>

<p>Details of positions:</p>

<p>1. Research Associate (two): bioinformatics/computational biology (One) and wet-lab biophysics (one).</p>

<p>2. Junior Research Fellow, JRF (One).</p>

<p>3. Project Assistant (One).</p>

<p>Fellowship: As per GOI rules.</p>

<p>Essential Qualifications:</p>

<p>1. Research Associate: Ph.D. in the above-mentioned fields, should be evident through quality publications. Those who have submitted Ph.D. thesis can also apply.</p>

<p>2. Junior Research Fellow: M.Sc. or equivalent in any branch of life sciences with a good academic record. Prior research experience is desirable.</p>

<p>3. Project Assistant: Graduation in any subject.</p>

<p>Must be familiar with working on computer and MS-Office.</p>

<p>Interested students can apply for the positions online using the following link http://goo.gl/forms/FEa802lNGc , latest by 16.03.16. The hard copy of the application is not required. The date of interview will be informed after primary scrutiny of the applications.</p>

<p>No TA/DA will be paid if called for interview. For any other enquiry email at msb.biochem@gmail.com .</p>

<p>For details of the research work of the PI’s group please visit www.ttripathi.webs.com</p>
]]></description>
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