Jit
Enthusiast computational biologist with business dream !!!
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Post-doc position at LABGeM - Evry, France
The LABGeM team (CEA/Genoscope, CNRS UMR 8030, France, Dir. Claudine Médigue) is developing integrated approaches which combines bioinformatics methods based (i) on genomic and metabolic contexts, (ii) on an orignal metabolic network representation...Project Assistant at IISER Mohali
Project Assistant Job position in Indian Institute of Science Education & Research (IISER) Mohali Title : In silico understanding of molecular basis of recognition, binding, and regulation of mRNA by STAR family of transcriptional...RATT
By Jitendra Narayan 3212 days agoratt.sourceforge.net - RATT is software to transfer annotation from a reference (annotated) genome to an unannotated query genome. It was first developed to transfer annotations between different genome assembly versions. However, it can also transfer annotations between...Pilon
By Rahul Nayak 3211 days agogithub.com - Pilon is a software tool which can be used to: Automatically improve draft assemblies Find variation among strains, including large event detection Pilon requires as input a FASTA file of the genome along with one or more BAM files of reads...destruct
By Jitendra Prajapati 3190 days agobitbucket.org - Destruct is a tool for joint prediction of rearrangement breakpoints from single or multiple tumour samples. More at https://bitbucket.org/dranew/destruct
List of Bioinformatics Software Tools for Next Generation Sequencing
Last updated 3111 days ago by JitCommercial tools Strand NGS offers many different tools including alignment, RNA-Seq, DNA-Seq, ChIP-Seq, Small RNA-Seq, Genome Browser, visualizations, Biological Interpretation, etc. Supports workflows “one can import the sample data in...REAPR: a universal tool for genome assembly evaluation
By Jitendra Prajapati 3153 days ago Comments (1)genomebiology.biomedcentral.com - REAPR is a tool that evaluates the accuracy of a genome assembly using mapped paired end reads, without the use of a reference genome for comparison. It can be used in any stage of an assembly pipeline to automatically break incorrect scaffolds and...MetaPred2CS
By Manisha Mishra 2823 days agogithub.com - MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction prediction methods to predict prokaryotic two-component...Anvio
By Shruti Paniwala 3082 days agogithub.com - In a nutshell Anvi’o is an analysis and visualization platform for ‘omics data. Please find the methods paper here: https://peerj.com/articles/1319/ Anvi’o would not have been possible without the help of many people who...Genome Workbench 2.10.7
By Gudiya Pal 3067 days agoGenome Workbench 2.10.7 is here! New features include added support for local custom BLAST databases and improvements to Tree View.
