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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/13267?</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/2728/statistics-of-current-sequencing-and-bioinformatics-market</guid>
	<pubDate>Wed, 21 Aug 2013 08:29:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2728/statistics-of-current-sequencing-and-bioinformatics-market</link>
	<title><![CDATA[Statistics of current Sequencing and Bioinformatics market]]></title>
	<description><![CDATA[<p>This survey conducted by&nbsp;<strong>Oxford&nbsp;<a href="http://www.ogt.co.uk/" target="_blank">Gene</a>&nbsp;Technology,</strong>&nbsp;<span>provider of innovative&nbsp;genetics&nbsp;research and&nbsp;biomarker</span>&nbsp;<span>solutions to advance molecular medicine, has released the results from a recent survey of researchers using next generation sequencing. (Source:<a href="http://www.news-medical.net/news/20130821/Oxford-Gene-Technology-releases-next-generation-sequencing-survey-results.aspx">http://www.news-medical.net/news/20130821/Oxford-Gene-Technology-releases-next-generation-sequencing-survey-results.aspx</a>&nbsp;)</span></p>
<p>&nbsp;</p><p>Address of the bookmark: <a href="http://www.ogt.com/assets/0000/3190/NGS_Survey_2013_Infographic_Web.pdf" rel="nofollow">http://www.ogt.com/assets/0000/3190/NGS_Survey_2013_Infographic_Web.pdf</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/13226/you-and-your-friend-have-similar-dna</guid>
	<pubDate>Sun, 27 Jul 2014 20:44:05 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/13226/you-and-your-friend-have-similar-dna</link>
	<title><![CDATA[You and your friend have similar DNA !!!]]></title>
	<description><![CDATA[<p>New research out of Massachusetts claims that people often choose friends that are similar to them in genetics and they are more accurate than you might suppose. A study published on PNAS&nbsp;http://www.pnas.org/content/111/Supplement_3/10796.full found that people are apt to pick friends who are genetically similar to themselves - so much so that friends tend to be as alike at the genetic level as a person's fourth cousin.</p><div style="text-align: center;"><img src="http://i.kinja-img.com/gawker-media/image/upload/s--CwLwHa43--/18fbmlokxcmqcjpg.jpg" alt="image" width="300" height="271" style="border: 0px; border: 0px;"></div><p>Scientists with a long-running Framingham Heart Study looked at 1,932 people (examination of about 1.5 million markers of genetic variations), comparing unrelated friends to unrelated strangers. They found that friends shared about 1% of their genes &mdash; a percentage much higher than those shared with strangers.This new findings made it clear that people have more DNA in common with those who are selected as friends than with strangers in the same population.&nbsp;</p><p>The genes that lined up the most were olfactory genes, which deal with smell. The ones that lined up the least were immune system genes. The researchers weren't sure why that happened :/. Olfactory genes might be a straightforward explanation: People who like the same smells tend to be drawn to similar environments, where they meet others with the same tendencies.</p><p>Reference:</p><p>http://www.pnas.org/content/111/Supplement_3/10796.full</p><p>Image : http://i.kinja-img.com</p>]]></description>
	<dc:creator>Jit</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/5402/key-bioinformatics-scientists</guid>
	<pubDate>Wed, 09 Oct 2013 13:37:07 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/5402/key-bioinformatics-scientists</link>
	<title><![CDATA[Key Bioinformatics Scientists]]></title>
	<description><![CDATA[<p>Address of the bookmark: <a href="http://www.iscb.org/iscb-leadership-a-staff-/officers-and-board-directors" rel="nofollow">http://www.iscb.org/iscb-leadership-a-staff-/officers-and-board-directors</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/3029/bioinformatics-market-in-india</guid>
	<pubDate>Fri, 23 Aug 2013 07:08:49 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/3029/bioinformatics-market-in-india</link>
	<title><![CDATA[Bioinformatics market in India]]></title>
	<description><![CDATA[<div><strong>Key Topics Covered in the Report:</strong></div>
<ul>
<li>The market size of the Indian Bioinformatics Industry , FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market segmentation of India bioinformatics industry by application by sectors, FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market Segmentation of India bioinformatics industry by products and services,FY&rsquo;2007-FY&rsquo;2013</li>
<li>Market Segmentation of India bioinformatics industry by applications of bioinformatics ,FY&rsquo;2007-FY&rsquo;2013</li>
<li>India bioinformatics industry trends and developments</li>
<li>Government regulations and initiatives of India bioinformatics industry</li>
<li>Major bioinformatics research institutes in India</li>
<li>Market Share of leading players in bioinformatics industry in India,FY&rsquo;2013</li>
<li>Company profiles of major players in India bioinformatics industry</li>
<li>Future outlook and projections on the basis of revenue in India bioinformatics market, FY&rsquo;2014-FY&rsquo;2018</li>
</ul>
<p>&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;(Source: Ken Research)</p><p>Address of the bookmark: <a href="http://www.kenresearch.com/healthcare/biotechnology/india-bioinformatics-industry-research-report/392-91.html" rel="nofollow">http://www.kenresearch.com/healthcare/biotechnology/india-bioinformatics-industry-research-report/392-91.html</a></p>]]></description>
	<dc:creator>Rahul Agarwal</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/9675/application-scientist-in-strand-lifesciences-bangalore</guid>
  <pubDate>Mon, 07 Apr 2014 08:17:32 -0500</pubDate>
  <link></link>
  <title><![CDATA[Application Scientist in Strand LifeSciences Bangalore]]></title>
  <description><![CDATA[
<p>Job Description<br />We are looking for a motivated application scientist to help evaluate, compare, and develop next generation sequencing (NGS) data analysis methods. The successful candidate should be able to quickly understand the state-of-art computational biology techniques, prototype them and perform benchmarking studies. The candidate must also be comfortable working with people from different disciplines and be able to present data analysis results in a clear and effective manner. The candidate is also expected to interact with customers as needed, write technical reports and publish new methods and/or data analysis findings in public forums.</p>

<p>Candidate Requirements:<br />A PhD in computer science, computational biology, Bioinformatics, or a related field, along with sufficient programming skills for prototyping. Experience with next generation sequencing data analysis is required. Candidates with MS degree but with relevant work experience can also be considered. </p>

<p>To Apply<br />To apply, please send your updated CV and cover letter to Dr. Rohit Gupta (rohit@strandls.com). </p>

<p>Source: http://www.strandls.com/application-scientist</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/18579/cluster-innovation-center-university-of-delhi</guid>
  <pubDate>Wed, 22 Oct 2014 10:39:49 -0500</pubDate>
  <link></link>
  <title><![CDATA[CLUSTER INNOVATION CENTER @ UNIVERSITY OF DELHI]]></title>
  <description><![CDATA[
<p>Applications for Pre-selection of  candidates under ‘Institutions Mode’ for DST-ISPIRE Faculty in  Computational Biology/ Systems Biology/ Bioinformatics</p>

<p>Applications are invited for pre-selection  of candidates for Ministry of Science and Technology, Department of Science and Technology INSPIRE Faculty Scheme: a component of “Assured Opportunity for Research Career (AORC)” under INSPIRE in the area of computational Biology/Systems Biology/Bioinformatics.</p>

<p>Candidates having done their B.Tech/B.E.  and or M.Sc./M.Tech in Computer Science or Biotechnology and Ph.D. in Systems/ Computational Biology or Bioinformatics may apply in the following format prescribed by DST to the Director, Cluster Innovation Center, University Stadium, GC Narang Marg, University of Delhi, Delhi -11107. Detials of other qualification, age limits etc., please visit www.inspire-dst.gov.in.</p>

<p>Application on the prescribed format may be submitted by email to director@cic.du.ac.in before October 25, 2014. Selected candidates shall be called for an interview. The date, time and venue of the interview shall be informed by email/telephone. For more information about Cluster Innovation Center, please visit https://ducic.ac.in.</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26306/busco</guid>
	<pubDate>Sun, 07 Feb 2016 16:02:39 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26306/busco</link>
	<title><![CDATA[BUSCO]]></title>
	<description><![CDATA[<p>Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs</p>
<p>More at http://busco.ezlab.org/</p><p>Address of the bookmark: <a href="http://busco.ezlab.org/" rel="nofollow">http://busco.ezlab.org/</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26332/pilon</guid>
	<pubDate>Mon, 08 Feb 2016 15:56:18 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26332/pilon</link>
	<title><![CDATA[Pilon]]></title>
	<description><![CDATA[<p>Pilon is a software tool which can be used to:</p>
<ul>
<li>Automatically improve draft assemblies</li>
<li>Find variation among strains, including large event detection</li>
</ul>
<p>Pilon requires as input a FASTA file of the genome along with one or more BAM files of reads aligned to the input FASTA file. Pilon uses read alignment analysis to identify inconsistencies between the input genome and the evidence in the reads. It then attempts to make improvements to the input genome, including:</p>
<ul>
<li>Single base differences</li>
<li>Small indels</li>
<li>Larger indel or block substitution events</li>
<li>Gap filling</li>
<li>Identification of local misassemblies, including optional opening of new gaps</li>
</ul>
<p>More at https://github.com/broadinstitute/pilon/wiki</p><p>Address of the bookmark: <a href="https://github.com/broadinstitute/pilon/wiki" rel="nofollow">https://github.com/broadinstitute/pilon/wiki</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26925/reapr-a-universal-tool-for-genome-assembly-evaluation</guid>
	<pubDate>Wed, 06 Apr 2016 18:26:31 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26925/reapr-a-universal-tool-for-genome-assembly-evaluation</link>
	<title><![CDATA[REAPR: a universal tool for genome assembly evaluation]]></title>
	<description><![CDATA[<p>REAPR is a tool that evaluates the accuracy of a genome assembly using mapped paired end reads, without the use of a reference genome for comparison. It can be used in any stage of an assembly pipeline to automatically break incorrect scaffolds and flag other errors in an assembly for manual inspection. It reports mis-assemblies and other warnings, and produces a new broken assembly based on the error calls.</p>
<p>The software requires as input an assembly in FASTA format and paired reads mapped to the assembly in a BAM file. Mapping information such as the fragment coverage and insert size distribution is analysed to locate mis-assemblies. REAPR works best using mapped read pairs from a large insert library (at least 1000bp). Additionally, if a short insert Illumina library is also available, REAPR can combine this with the large insert library in order to score each base of the assembly.</p>
<p>http://www.sanger.ac.uk/science/tools/reapr</p><p>Address of the bookmark: <a href="https://genomebiology.biomedcentral.com/articles/10.1186/gb-2013-14-5-r47" rel="nofollow">https://genomebiology.biomedcentral.com/articles/10.1186/gb-2013-14-5-r47</a></p>]]></description>
	<dc:creator>Jitendra Prajapati</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4210/uni-computing-bergen-norway</guid>
  <pubDate>Tue, 03 Sep 2013 18:40:50 -0500</pubDate>
  <link></link>
  <title><![CDATA[Uni Computing Bergen Norway]]></title>
  <description><![CDATA[
<p>Info on Uni Computing (Webpage: http://www.bccs.uni.no/) :</p>

<p>Uni Computing (formerly Uni BCCS) is a department of Uni Research, affiliated with the University of Bergen.</p>

<p>5 groups in this lab works on computational resources, methods, algorithms, and software.</p>

<p>Following two bioinformatics groups are:</p>

<p>The Computational Biology Unit (CBU) provides education and research in bioinformatics focused on functional genomics.</p>

<p>The Computational Ecology Unit (CEU) is basically deal with population fluctuations, behavioural patterns and the ways life cycles emerge.</p>
]]></description>
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