BOL: Related items

Software developed in pevsner lab

Robert M Willioms — Mon, 06 Oct 2014 12:41:26 -0500

DRAGON: Database Referencing of Array Genes Online

SNOMAD: Standardization and Normalization of Microarray Data

SNPduo: SNP Analysis Between Two Individuals

SNPtrio: Analyzing and Visualizing and Inheritance Patterns in Trios

SNPscan: Data Analysis and Visualization of SNP Data

pediSNP: Analyze SNP Data From a Pedigree of Two Generations

kcoeff: Calculate Cotterman Coefficients of SNP Genotype Data

triPOD: Detects chromosomal abnormalities in parent-child trio-based microarray data

Address of the bookmark: http://pevsnerlab.kennedykrieger.org/php/?q=software

LoVis4u: Locus Visualisation tool for comparative genomics

LEGE — Tue, 17 Sep 2024 02:30:57 -0500

Description

LoVis4u is a bioinformatics tool for Loci Visualisation.

LoVis4u, a command-line tool and Python API designed for highly customizable and fast visualisation of multiple genomic loci. LoVis4u generates vector images in PDF format based on annotation data from GenBank or GFF files. It is capable of visualising entire genomes of bacteriophages as well as plasmids and user-defined regions of longer prokaryotic genomes. Additionally, LoVis4u offers optional data processing steps to identify and highlight accessory and core genes in input sequences.

https://art-egorov.github.io/lovis4u/

Address of the bookmark: https://github.com/art-egorov/lovis4u

Gupta Lab

Sun, 15 Sep 2013 09:31:24 -0500

Gupta laboratory of Natural Information Processing at DA-IICT. Research in our lab currently focuses on two aspects of information processing viz. deciphering the information processing principles in life (systems biology) and making a computer out of bio-molecules. The key expertise of the lab is in error-correcting codes. We also work in classical and quantum information processing principles with expertise in coding theory and its wide variety of applications in Information and Communication Technology (ICT).

More @ http://www.guptalab.org/

OSDDlinux : Computational resources for drug discovery

Archana Malhotra — Sun, 22 Sep 2013 13:15:58 -0500

Open Source Drug Discovery (OSDD), a mission to provide affordable drugs for poors, is in the process of creating an in silico plateform for designing, discovering and simulating drugs. OSDD have initiate number of projects to support in silico drug discovery, including OSDDlinux and computational resources for drug discovery (CRDD).

The main purpose of OSDDLinux is to provide an in silico platform for computer-aided drug design. This is a collection and compilation of large number of software and web services which will be directly or indirectly useful for researches working in the field of drug design/discovery. Overall objective of OSDDlinux is to promote open source in drug discovery, crowdsourcing and network based collobrations. Following are major features of OSDDlinux ...

Find more @ http://osddlinux.osdd.net/index.php

Professor / Associate Professor / Assistant Professor / Lecturer at IIIT Hyderabad

Tue, 12 Jan 2016 02:15:43 -0600

Professor / Associate Professor / Assistant Professor / Lecturer
The International Institute of Information Technology, a Deemed University (formerly Indian Institute of Information Technology, Hyderabad), is a world-class institution, where the passion for learning, teaching, research, problem-solving, and making a difference, is celebrated, invites exceptional teachers & researchers to join as Faculty.

With emphasis on research, the institute has large research centers with over 100 PhD & 250 MS by Research students working on wide ranging topics: Computer Science, Information Security, Software engineering, AI & Robotics, VLSI and Embedded Systems, Digital Signal Processing, Computer Aided Structural Engineering (CASE), Computational Natural Sciences, Bio informatics, Computational Linguistics, IT and social development, Exact Humanities, etc., IIIT-H provides a flexible environment which active industry collaborations for conducting research.

The institute is seeking Faculty Members at all levels in the following areas:
Computational & Theoretical Chemistry/Physics/Biology(CNS)
Bioinformatics(BI)
Computational Linguistics
Mathematics & Statistics
IT for Agriculture

We also encourage applications from other areas of national importance (such as, agriculture, health, e-governance, education, policy studies, arts, etc)wherein there is a strong need to come up with IT/ECE enabled solutions.

Academic & Research Programs at the institute:
BTech, MS by Research, PostBSc Dual Degree, MTech, MPhil and PhD.

Eligibility
Candidates should normally have a PhD and an outstanding research record and commitment to teaching. The position and level offered would be based on relevant experience in research and teaching. Candidates without a PhD but demonstrated research record can also be considered in special cases. The compensation (including HRA, LTA, Medical Reimbursement, Research Allowance, etc) is designed to reward the best talent and will not be a limiting factor for the right person.

International Institute of Information Technology
Gachibowli, Hyderabad - 500 032.
Fax:+91-40-6653 1413; e-mail: facultysearch@iiit.ac.in

Lectureship Program : Outstanding candidates with B.Tech/MCA or M.Tech and desirous of joining faculty can apply for lectureship position and enroll for PhD at the same time. Applications for this program can be sent to facultysearch@iiit.ac.in .

More at http://oldwww.iiit.ac.in/content/faculty-openings/

Updated ranking of institutes and countries based on developed biological databases

Rahul Nayak — Fri, 11 Jan 2019 09:35:26 -0600

Updated ranking of institutes and countries based on developed biological databases is available at https://lnkd.in/fiVAdM6 , India is maintaing 4th position and "Institute of Microbial Technology, Chandigarh" is on 3rd Position (after EBI and NCBI). This is a big achievement for any institute to reach on 3rd position in the world.

More at http://bigd.big.ac.cn/databasecommons/stat

Where to Aproach for R&D Funds in India ?

Surabhi Chaudhary — Thu, 24 Jun 2021 01:04:30 -0500

Companies and governments do research and development (R&D/ R'n'D/ R+D) to promote innovation in order to produce new goods or services and/or enhance existing product lines. R&D covers all actions inside an organization aimed at boosting innovation, such as creating incubators, assisting innovators in scaling up their ideas, and cultivating an innovation culture.

Here are the list of all the research and development funding agencies in India.

What is Health Informatics?

Wed, 12 Mar 2014 14:50:46 -0500

What is health informatics? In the words of Dr. Noni MacDonald...: "Most of the way I've seen it defined is the intersection with health information, computer science and health care and health systems but I think that's very linear and very narrow in what it is. For me what Health Informatics is really is about is how do we take all of these tools and have everybody able to manage health, health care systems and their own personal health in a better way. That's whether you're the mayor of the city, whether you're the Dean of Medicine, whether you're the CEO of one of the biggest health organization or you're John Q Public who's just cut their finger. That's what it's all about." Filmed at Dalhousie University during summer 2010. Edited by Mohammed Al-Bakri during summer 2011. Thanks to the participants: Dr. Grace Paterson Dr. Noni MacDonald Dr. Ray LeBlanc Dr. Ajantha Jayabarathan Mr. Amir Feridooni Dr. Raza Abidi Dr. Brett Taylor

Internship Program for Bioinformatics / Biotechnology / MBA / MCA (No. Of Vacancy: 5)

Mon, 15 Dec 2014 08:11:02 -0600

ArrayGen is offering an Internship Program for Post graduate Bioinformatics / Biotechnology / MBA / MCA students and professionals. ArrayGen Technologies provide an excellent opportunity to gain research experience and explore if a scientific career is right for you. Currently we offer positions to outstanding students interested in Next Generation Sequencing (NGS) data analysis or marketing or software development. Applications are accepted throughout the year. Accepted students will be notified through email.

AGRICUL AGRICULTURAL SCIENTISTS RECRUITMENT BOARD TURAL SCIENTISTS RECRUITMENT BOARD NEW DELHI-110 012

Wed, 11 Mar 2015 09:18:37 -0500

ADVERTISEMENT NO. 01/2015

PRINCIPAL SCIENTIST Pay Band: Minimum pay of `43,000 in the PB-4 of `37400-67000/- + RGP of `10,000/-.

Age: The candidates must not have attained the age of 52 years as on 24.03.2015. There shall be no age limit for the Council’s employees.

ICAR-NATIONAL INSTITUTE OF BIOTIC STRESS MANAGEMENT, RAIPUR (CHHATTISGARH)

57. Principal Scientist (Agricultural Entomology) (Two post)

Qualifications Essential:

(i) Doctoral degree in Agricultural Entomology including relevant basic sciences.

(ii) 10 years experience in the relevant subject out of which at least 8 years should be as Scientist/ Lecturer/Extension Specialist or in an equivalent position in the Pay Band- 3 of `15600-39100 with Grade Pay of `5400/`6000/`7000/`8000 and 2 years as a Senior Scientist or in an equivalent position in the Pay Band- 4 of ` 37400-67000 with Grade Pay of ` 8700/ ` 9000.

(iii) The candidate should have made contribution to research/teaching/extension education as evidenced by published work/innovations and impact.

Desirable:

(i) Experience of using frontiers research tools in management of insect pests of crop plants.

(ii) Evidence of contributions to relevant field through publications/ patents/citation index to suggest a vision/perspective in biotic stress research.

61. Principal Scientist (Bioinformatics) (One post)

Qualifications Essential:

(i) Doctoral degree in Bioinformatics including relevant basic sciences. (ii) & (iii) As in item no. 57 above.

Desirable:

(i) Experience of using bioinformatics for advancement of knowledge and for research on biotic stress management.

(ii) Evidence of contributions to relevant field through publications/patents/citation index to suggest a vision/perspective in biotic stress research.

http://asrb.org.in/administrator/uploads_dir/1424859407english.pdf