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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/1515?offset=480</link>
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	<description><![CDATA[]]></description>
	
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/914/welch-lab</guid>
  <pubDate>Mon, 15 Jul 2013 18:21:13 -0500</pubDate>
  <link></link>
  <title><![CDATA[Welch Lab]]></title>
  <description><![CDATA[
<p>They are based in the Department of Genetics at the University of Cambridge. </p>

<p>The research covers diverse areas of evolutionary biology, and molecular evolution in particular. It combines theoretical and empirical approaches, and particularly evolutionary inference from genome sequence data.</p>

<p>Links @ http://www.gen.cam.ac.uk/research/welch/GroupPage/Home.html</p>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/1212/computational-proteomics-lets-remember-the-basics</guid>
	<pubDate>Thu, 01 Aug 2013 17:24:20 -0500</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/1212/computational-proteomics-lets-remember-the-basics</link>
	<title><![CDATA[Computational Proteomics : Lets remember the basics]]></title>
	<description><![CDATA[<p>I spend some of my valuable time in computational drug designing sector. I remember my initial proteomics days, playing with interactive protein visualization software and dreaming big. Fortunately or unfortunately, I switched to genomics and handling the genomic floods in Petabytes which is expected to be in Brontobytes in coming years. Did I mention Brontobytes ??? Let me call to my server personnel &hellip; it gonna tsunami !!!!!</p><p>Today, refreshing my old memories I decided to blog about the basic knowledge of biochemistry and computational proteomics&nbsp;skills, but after I found several article on internet saying exactly what I had wanted to say I thought I might as well just redirect BOL's blog readers there instead:</p><p>Here is the list of website and videos links which provide a good resource for you basic chemistry need:</p><p><a href="http://tecreativ.blogspot.co.uk/2012/09/funny-shortcut-remember-periodic-table.html"></a><a href="http://tecreativ.blogspot.co.uk/2012/09/funny-shortcut-remember-periodic-table.html"></a><a href="http://tecreativ.blogspot.co.uk/2012/09/funny-shortcut-remember-periodic-table.html"></a><a href="http://tecreativ.blogspot.co.uk/2012/09/funny-shortcut-remember-periodic-table.html">http://tecreativ.blogspot.co.uk/2012/09/funny-shortcut-remember-periodic-table.html</a></p><p>This blog have some specific hindi word to remember entire periodic table. I really like</p><p>Group 14 (C Si Ge Sn Pb) -&gt; Sentence &ldquo;<strong>C</strong>hemistry&nbsp;<strong>Si</strong>r&nbsp;<strong>G</strong>iv<strong>e</strong>s&nbsp;<strong>S</strong>a<strong>n</strong>ki&nbsp;<strong>P</strong>ro<strong>b</strong>lems&rdquo;</p><p>Sanki is a hindi word which mean crazy :P</p><p>I found this link useful as well&nbsp;<a href="http://www.wikihow.com/Memorise-the-Periodic-Table"></a><a href="http://www.wikihow.com/Memorise-the-Periodic-Table"></a><a href="http://www.wikihow.com/Memorise-the-Periodic-Table"></a><a href="http://www.wikihow.com/Memorise-the-Periodic-Table">http://www.wikihow.com/Memorise-the-Periodic-Table</a></p><p>The eagle genomics group provide an element of bioinformatics in periodic tables. Yes you got it, this is not periodic table rather bioinformatics tools with periodicals</p><p><a href="http://elements.eaglegenomics.com/"></a><a href="http://elements.eaglegenomics.com/"></a><a href="http://elements.eaglegenomics.com/"></a><a href="http://elements.eaglegenomics.com/">http://elements.eaglegenomics.com/</a></p><p>You can also try this video links, which provide you an overview with tricks on periodic tables:</p><p><a href="http://www.youtube.com/watch?v=fLSfgNxoVGk"></a><a href="http://www.youtube.com/watch?v=fLSfgNxoVGk"></a><a href="http://www.youtube.com/watch?v=fLSfgNxoVGk"></a><a href="http://www.youtube.com/watch?v=fLSfgNxoVGk">http://www.youtube.com/watch?v=fLSfgNxoVGk</a></p><p><a href="http://www.youtube.com/user/periodicvideos"></a><a href="http://www.youtube.com/user/periodicvideos"></a><a href="http://www.youtube.com/user/periodicvideos"></a><a href="http://www.youtube.com/user/periodicvideos">http://www.youtube.com/user/periodicvideos</a></p><p>For drug design educational material, software, tools, databses, viewer, file format and many more stuff at one place&nbsp;<a href="http://www.allfordrugs.com/drug-design/.%C2%A0I"></a><a href="http://www.allfordrugs.com/drug-design/"></a><a href="http://www.allfordrugs.com/drug-design/"></a><a href="http://www.allfordrugs.com/drug-design/">http://www.allfordrugs.com/drug-design/</a>&nbsp;I highly recommend you all computational drug designer to bookmark this page for future studies as well.</p><p>I just remember one of my mini project in which I use my flash knowledge (flash .. oh ya flash) to explain amino acids in interactive and user friendly manner. I can&rsquo;t provide It right now, but promise you to provide a link in near future. I hope that you will enjoy my flashy creative skills :).</p><p>Moreover, I found some of very interesting tricks to remember all amino acids chemical formulae on youtube at</p><p><a href="http://www.youtube.com/watch?v=gqrWb0fmzQ&amp;list=PL6132651E70BB5575"></a><a href="http://www.youtube.com/watch?v=gqrWb0fmzQ&amp;list=PL6132651E70BB5575"></a><a href="http://www.youtube.com/watch?v=gqrWb0fmzQ&amp;list=PL6132651E70BB5575"></a><a href="http://www.youtube.com/watch?v=gqrWb0fmzQ&amp;list=PL6132651E70BB5575">http://www.youtube.com/watch?v=gqrWb0fmzQ&amp;list=PL6132651E70BB5575</a></p><p><a href="http://www.youtube.com/watch?v=C2GfoGXfySQ&amp;list=PL6132651E70BB5575"></a><a href="http://www.youtube.com/watch?v=C2GfoGXfySQ&amp;list=PL6132651E70BB5575"></a><a href="http://www.youtube.com/watch?v=C2GfoGXfySQ&amp;list=PL6132651E70BB5575"></a><a href="http://www.youtube.com/watch?v=C2GfoGXfySQ&amp;list=PL6132651E70BB5575">http://www.youtube.com/watch?v=C2GfoGXfySQ&amp;list=PL6132651E70BB5575</a></p><p><br />Key points for computer added drug designers?<br />1. A shortage of biochemistry skills means that you absolutely nowhere in understanding the key concept and do research.<br />2. Keep handy with complex mathematical formula, before merely running tools or software.<br />3. Dig it better and deeper guys .. design it.</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/4003/personalised-medicine-animation</guid>
	<pubDate>Tue, 27 Aug 2013 10:07:24 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/4003/personalised-medicine-animation</link>
	<title><![CDATA[Personalised Medicine - Animation]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/fEY3Khsmuak" frameborder="0" allowfullscreen></iframe>Two animated case scenarios set now and in the future. These highlight potential differences in the way patients are treated now, and how they might be treated as healthcare becomes more tailored.]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2054/postdoc-positions-mammalian-transcriptome-evolution-at-sib</guid>
  <pubDate>Mon, 12 Aug 2013 19:58:33 -0500</pubDate>
  <link></link>
  <title><![CDATA[Postdoc Positions - Mammalian Transcriptome Evolution at SIB]]></title>
  <description><![CDATA[
<p>BIOINFORMATICS POSTDOC IN FUNCTIONAL EVOLUTIONARY GENOMICS</p>

<p>Center for Integrative Genomics, University of Lausanne, Switzerland</p>

<p>Two postdoctoral positions (2 years with possible extensions up to 5 years) are available immediately in the evolutionary genomics group of Henrik Kaessmann.</p>

<p>We are seeking highly qualified and enthusiastic applicants with strong skills in computational biology/bioinformatics, preferably also with experience in data mining and comparative or evolutionary genome analysis.</p>

<p>We have been interested in a range of topics related to the functional evolution of genomes from primates (e.g., the emergence of new genes and their functions) and other mammals (e.g., the origin and evolution of mammalian sex chromosomes). In the framework of a recently launched series of projects, a large amount of transcriptome and genome (e.g., epigenome) data are being produced by the wet lab unit of the group using next generation sequencing technologies for a unique collection of tissues from representative mammals and outgroup species (e.g., birds). Topics of current projects based on these data include the origins and/or evolution of protein-coding genes, alternative splicing, microRNAs, long noncoding RNAs, and dosage compensation.</p>

<p>The postdoctoral fellow will perform integrated evolutionary/bioinformatics analyses based on data produced in the lab and available genomic data. The specific project will be developed together with the candidate.</p>

<p>The language of the institute is English, and its members form an international group that is rapidly expanding. The institute is located in Lausanne, a beautiful city at Lake Geneva.</p>

<p>For more information on the group and our institute more generally, please refer to our website: http://www.unil.ch/cig/page7858_en.html</p>

<p>Please submit a CV, statement of research interest, and names of three references to: Henrik Kaessmann (Henrik.Kaessmann@unil.ch).</p>

<p>Webpage : http://www.unil.ch/cig/page7858.html</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/2464/computer-theory-genetics-george-chao-at-tedxumnsalon</guid>
	<pubDate>Thu, 15 Aug 2013 22:08:10 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/2464/computer-theory-genetics-george-chao-at-tedxumnsalon</link>
	<title><![CDATA[Computer Theory & Genetics: George Chao at TEDxUMNSalon]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/7_GL17oiak8" frameborder="0" allowfullscreen></iframe>George Chao is an undergraduate senior studying Genetics and Computer Science at the University of Minnesota. Having started genetics research as soon as he entered the university, he has worked in labs spanning multiple disciplines as well as in Japan. Some of these researches include developmental genetics in Drosophila, computational techniques for analyzing protein interactions, and helping with the development of algorithms to analyze motion capture data of patients with neck pain. During this time, George steadily developed a fascination with the field of bioinformatics, the study of using computational techniques to learn from genetic data. He would like to go into a career of research into the application of bioinformatics in various fields.

----

The individuals involved with TEDxUMN have a passion for bringing together the great thinkers at the University of Minnesota and giving them the opportunity to share their ideas worth spreading and to discuss our shared future. We provide these great people the opportunity to share these ideas on a global stage and with an incredibly diverse audience. We believe in the power of ideas to change attitudes, lives and ultimately the world.

Check out TEDxUMN at http://www.TEDxUMN.com/

In the spirit of ideas worth spreading, TEDx is a program of local, self-organized events that bring people together to share a TED-like experience. At a TEDx event, TEDTalks video and live speakers combine to spark deep discussion and connection in a small group. These local, self-organized events are branded TEDx, where x = independently organized TED event. The TED Conference provides general guidance for the TEDx program, but individual TEDx events are self-organized.* (*Subject to certain rules and regulations)]]></description>
	
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/38302/senior-bioinformatics-scientist-at-elucidata</guid>
  <pubDate>Tue, 27 Nov 2018 04:05:57 -0600</pubDate>
  <link></link>
  <title><![CDATA[Senior Bioinformatics Scientist at Elucidata]]></title>
  <description><![CDATA[
<p>Key Responsibilities <br />- Process and analyse metabolomic, transcriptional, genomics, proteomics <br />and any other kind of biological data. <br />- Interpret the data in the context of relevant biological literature to generate <br />actionable insights. <br />- Communicate the findings from data and literature to biologists and use the <br />biological insights to derive next steps/analyses. <br />- Communicate work through blogs, meet-ups, research papers, posters, etc. <br />- Identify, troubleshoot, and implement improvements to existing pipelines <br />and algorithms. <br />- Identify and implement new tools and pipelines to use for different types of <br />biological data. <br />- Work in a multi-disciplinary team with biologists, data scientists and data <br />analysts. <br />- Help with any other requirements (from database design to generating <br />prototypes for the product team).</p>

<p>Requirements <br />- 3-5 years of relevant bioinformatics experience such as public data mining, <br />processing, analysing and visualising omics data, etc. <br />- Ph.D., Masters or Bachelors in Bioinformatics, Biotechnology, <br />Computational Biology, or related field. <br />- Understanding of molecular biology and biochemistry. <br />- Comfort and experience with biological research and data. <br />- Proficient in a programming language used for bioinformatics such as R or <br />python. <br />- Excellent communication skills. <br />- Ability to summarise and simplify complex analyses for a non-technical <br />audience. <br />- Strong analytical skills, curiosity and a knack to solve difficult problems. <br />- Work well in multi-disciplinary teams with people of vastly different <br />backgrounds. <br />- Demonstrated success in collaboration and independent work.</p>

<p>More at https://angel.co/elucidata/jobs/460104-senior-bioinformatics-scientist</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2680/4-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products</guid>
  <pubDate>Tue, 20 Aug 2013 08:42:29 -0500</pubDate>
  <link></link>
  <title><![CDATA[4 positions in high throughput computational metagenomics and systems biology of natural products]]></title>
  <description><![CDATA[
<p>The Research and Innovation Centre at the Fondazione Edmund Mach (CRI-FEM) is a major international research institution with strong and expanding research interests in Fruit Genomics, Quality Health and Nutrition of Agricultural Products, Agro-ecosystems Sustainability, Biodiversity and Molecular Ecology.</p>

<p>CRI-FEM hosts GMPF, an International PhD Program in Genomics and Molecular Physiology of Fruit Crops and Fox-Lab, an international initiative in forest and wood research.<br />4 positions in high throughput computational metagenomics and systems biology of natural products - deadline September 30th, 2013</p>

<p>To support interdisciplinary research, CRI-FEM has established the Computational Biology Centre (CBC).</p>

<p>The mission of CBC is to develop systems-level integrative approaches connecting genotype to phenotype with a special focus on genome-wide analyses and next generation sequencing technologies. </p>

<p>CRI-FEM is seeking to attract 4 high calibre scientists in the areas of high throughput computational metagenomics and systems biology of natural products.</p>

<p>Here below the list of the 4 positions:</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Post-doc-in-Metagenomics-screening-and-characterization-of-bioactive-microbial-compounds-130_CRI_MSC</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Post-doc-in-Modeling-transcriptional-control-programs-at-a-genome-wide-scale-131_CRI_TCP</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Technologist-in-Purification-of-plant-bioactive-molecules-from-complex-matrixes-132_CRI_PBM</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Researcher-in-Methods-for-algorithmic-and-integrative-genomics-for-metagenomics-134_CRI_AIG</p>

<p>For more information on the CBC or informal inquiries on the advertised positions please contact Dr Duccio Cavalieri (e-mail duccio.cavalieri@fmach.it).</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/40945/the-clark-lab</guid>
  <pubDate>Fri, 07 Feb 2020 13:57:24 -0600</pubDate>
  <link></link>
  <title><![CDATA[The Clark Lab]]></title>
  <description><![CDATA[
<p>Study the process of Adaptive Evolution, during which species adopt novel traits to overcome challenges. We retrace the evolutionary histories of genomic elements to determine the changes underlying adaptation and to discover previously unknown genetic networks. These discoveries have already led to advances in human health, species conservation, and molecular biology. </p>

<p>More at http://clark.genetics.utah.edu/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41905/research-associate-bioinformatics-in-iisc-recruitment-2020</guid>
  <pubDate>Tue, 23 Jun 2020 21:53:34 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics in IISc Recruitment 2020]]></title>
  <description><![CDATA[
<p>Research Associate Bioinformatics in IISc Recruitment 2020</p>

<p>Essential Qualifications: Ph.D. (Bioinformatics/ Biophysics/ Biotechnology or any other stream of biological/ physical sciences) with a minimum of two publications in reputed peer reviewed journals in the area of structural bioinformatics or biophysics or biomolecular modeling/ simulation.</p>

<p>Job description: Development of bioinformatics tools and algorithms/software for structure based analysis of biomolecular systems. Programmatic access to major biomolecular databases using APIs Knowledge based prediction and analysis of biomolecular structure, function and interactions. Docking/simulations for inhibitor design.</p>

<p>Desirable Qualifications (Research Associate/s): i)  Strong computer programming skills (in Python/PERL/PHP or C++ or object oriented database management systems like MySQL etc or scripting languages under LINUX/UNIX environment). </p>

<p>ii) Extensive experience in computational analysis of biomolecular structure/interactions and usage of advanced biomolecular simulation softwares. iii) Adequate knowledge of major databases, webservers and softwares in the area of biomolecular structure/function and drug design. iv)  Familiarity with Parallel Programming environments and experience in usage of high-end HPC clusters.</p>

<p>The candidates must highlight their experience in above mentioned fields/topics in their CV. Initial appointment will be for a period of 1 year, subject to extension after review of performance.</p>

<p>Emoluments: As per DST, GOI norms and commensurate with experience.</p>

<p>More at https://www.iisc.ac.in/positions-open/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4108/tijana-milenkovic-lab</guid>
  <pubDate>Fri, 30 Aug 2013 06:45:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[Tijana Milenkovic Lab]]></title>
  <description><![CDATA[
<p>Complex networks and network mining: developing graph theoretic, mathematical, and computational algorithms for efficient extraction of function from topology of complex real-world networks, such as biological, social, and technological networks.</p>

<p>Computational and systems biology: studying the interplay between network topology and biological function, disease, and evolution in molecular (e.g., protein-protein interaction) networks.</p>

<p>Computational chemistry: protein folding; computational drug discovery and design.</p>

<p>Synthetic biology.</p>

<p>More at http://www.cse.nd.edu/~tmilenko/index.html</p>
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