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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/19786?offset=110</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/2423/cancers-origins-revealed</guid>
	<pubDate>Thu, 15 Aug 2013 13:06:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/2423/cancers-origins-revealed</link>
	<title><![CDATA[Cancer's origins revealed]]></title>
	<description><![CDATA[<p>Researchers have provided the first comprehensive compendium of mutational processes that drive tumour development. Together, these mutational processes explain most mutations found in 30 of the most common cancer types. This new understanding of cancer development could help to treat and prevent a wide-range of cancers.<br /><br />More at &gt;&gt; http://www.sanger.ac.uk/about/press/2013/130814.html</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2680/4-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products</guid>
  <pubDate>Tue, 20 Aug 2013 08:42:29 -0500</pubDate>
  <link></link>
  <title><![CDATA[4 positions in high throughput computational metagenomics and systems biology of natural products]]></title>
  <description><![CDATA[
<p>The Research and Innovation Centre at the Fondazione Edmund Mach (CRI-FEM) is a major international research institution with strong and expanding research interests in Fruit Genomics, Quality Health and Nutrition of Agricultural Products, Agro-ecosystems Sustainability, Biodiversity and Molecular Ecology.</p>

<p>CRI-FEM hosts GMPF, an International PhD Program in Genomics and Molecular Physiology of Fruit Crops and Fox-Lab, an international initiative in forest and wood research.<br />4 positions in high throughput computational metagenomics and systems biology of natural products - deadline September 30th, 2013</p>

<p>To support interdisciplinary research, CRI-FEM has established the Computational Biology Centre (CBC).</p>

<p>The mission of CBC is to develop systems-level integrative approaches connecting genotype to phenotype with a special focus on genome-wide analyses and next generation sequencing technologies. </p>

<p>CRI-FEM is seeking to attract 4 high calibre scientists in the areas of high throughput computational metagenomics and systems biology of natural products.</p>

<p>Here below the list of the 4 positions:</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Post-doc-in-Metagenomics-screening-and-characterization-of-bioactive-microbial-compounds-130_CRI_MSC</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Post-doc-in-Modeling-transcriptional-control-programs-at-a-genome-wide-scale-131_CRI_TCP</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Technologist-in-Purification-of-plant-bioactive-molecules-from-complex-matrixes-132_CRI_PBM</p>

<p>http://www.fmach.it/eng/Servizi-Generali/Lavora-con-noi/Annunci-lavoro-e-borse-di-studio/Details-of-the-5-positions-in-high-throughput-computational-metagenomics-and-systems-biology-of-natural-products-deadline-September-30th-2013/Researcher-in-Methods-for-algorithmic-and-integrative-genomics-for-metagenomics-134_CRI_AIG</p>

<p>For more information on the CBC or informal inquiries on the advertised positions please contact Dr Duccio Cavalieri (e-mail duccio.cavalieri@fmach.it).</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41991/sequence-ontology-bioinformatics-analysis-soba-tool-to-provide-a-simple-statistical-and-graphical-summary-of-an-annotated-genome</guid>
	<pubDate>Wed, 22 Jul 2020 10:11:13 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41991/sequence-ontology-bioinformatics-analysis-soba-tool-to-provide-a-simple-statistical-and-graphical-summary-of-an-annotated-genome</link>
	<title><![CDATA[Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome]]></title>
	<description><![CDATA[<p><span>We have developed the Sequence Ontology Bioinformatics Analysis (SOBA) tool to provide a simple statistical and graphical summary of an annotated genome. We envisage its use during annotation jamborees, genome comparison and for use by developers for rapid feedback during annotation software development and testing. SOBA also provides annotation consistency feedback to ensure correct use of terminology within annotations, and guides users to add new terms to the Sequence Ontology when required. SOBA is available at http://www.sequenceontology.org/cgi-bin/soba.cgi.</span></p>
<p><span>More at <a href="https://pubmed.ncbi.nlm.nih.gov/20494974/">https://pubmed.ncbi.nlm.nih.gov/20494974/</a></span></p><p>Address of the bookmark: <a href="http://www.sequenceontology.org/cgi-bin/soba.cgi" rel="nofollow">http://www.sequenceontology.org/cgi-bin/soba.cgi</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4108/tijana-milenkovic-lab</guid>
  <pubDate>Fri, 30 Aug 2013 06:45:20 -0500</pubDate>
  <link></link>
  <title><![CDATA[Tijana Milenkovic Lab]]></title>
  <description><![CDATA[
<p>Complex networks and network mining: developing graph theoretic, mathematical, and computational algorithms for efficient extraction of function from topology of complex real-world networks, such as biological, social, and technological networks.</p>

<p>Computational and systems biology: studying the interplay between network topology and biological function, disease, and evolution in molecular (e.g., protein-protein interaction) networks.</p>

<p>Computational chemistry: protein folding; computational drug discovery and design.</p>

<p>Synthetic biology.</p>

<p>More at http://www.cse.nd.edu/~tmilenko/index.html</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4657/giovanni-parmigiani-lab</guid>
  <pubDate>Fri, 20 Sep 2013 13:21:41 -0500</pubDate>
  <link></link>
  <title><![CDATA[Giovanni Parmigiani Lab]]></title>
  <description><![CDATA[
<p>Scientific Interests:</p>

<p>Models and software for predicting who is at risk of carrying genetic variants that confer susceptibility to cancer. Application to breast, ovarian, colorectal, pancreatic and skin cancer.</p>

<p>Statistical methods for the analysis of high throughput genomic data: analysis of cancer genome sequencing projects; integration of genomic information across technologies; cross-study validation of genomics results.</p>

<p>Statistical methods for comparative effectiveness research: comprehensive models for lifetime history of chronic disease outcomes; Bayesian meta-analysis; Bayesian causal inference; decision analysis.</p>

<p>Bayesian modeling and computation: multilevel models; decision theoretic approaches to inference; sequential experimental design and their application to adaptive and multistage studies in clinical and epidemiological research.</p>

<p>http://bcb.dfci.harvard.edu/~gp/index.html</p>

<p>http://scholar.google.com/citations?user=OlpYP3UAAAAJ&amp;hl=en</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43292/bioinformatics-scientist-production-bioinformatics-south-san-francisco-ca</guid>
  <pubDate>Thu, 19 Aug 2021 08:45:24 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Scientist, Production Bioinformatics @ South San Francisco, CA]]></title>
  <description><![CDATA[
<p>wist is looking for a Bioinformatics Scientist to join our Production Bioinformatics Team. You will work alongside research scientists, software engineers and data scientists to further deliver on our mission to expand access to best-in-class synthetic biology and next-generation sequencing applications. You will be developing and engineering tools to better evaluate and build hardened, production quality pipelines, optimize data quality, and automate lab and bioinformatics processes. Our ideal candidate is an organized problem solver with a background in developing and building novel production-quality bioinformatics tools and packages. Equally excellent communication skills and a proven ability to work independently are required.</p>

<p>More at https://boards.greenhouse.io/twistbioscience/jobs/3135495?gh_src=9ecc0b941us</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/4755/sundar-lab</guid>
  <pubDate>Mon, 23 Sep 2013 11:10:16 -0500</pubDate>
  <link></link>
  <title><![CDATA[Sundar Lab]]></title>
  <description><![CDATA[
<p>Area of interest 		</p>

<p>Understanding DNA-protein interactions, genome engineering<br />Computational Genomics and Bioinformatics<br />Secondary metabolite biosynthesis, metabolic engineering</p>

<p>Ongoing Projects:</p>

<p>"Betraying the parasite’s redox system: Studies on spermidine synthase of Leishmania donovani " </p>

<p>"Towards modifying nature's DNA-recognition system" </p>

<p>"Yield enhancement strategies for production of therapeutic compounds by cell and tissue cultures of Tinospora cordifolia (willd.) Miers ex Hook. F. &amp; Thoms" </p>

<p>"Program support for Computational Genomics" </p>

<p>More at http://web.iitd.ac.in/~sundar/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43559/job-offer-for-a-postdoctoral-researcher-in-genomics-bioinformatics-2-years</guid>
  <pubDate>Fri, 22 Oct 2021 04:44:33 -0500</pubDate>
  <link></link>
  <title><![CDATA[Job offer for a postdoctoral researcher in genomics / bioinformatics (2 years)]]></title>
  <description><![CDATA[
<p>Ongoing research in the group of Karine Van Doninck involves topics at the core of<br />evolutionary biology, including the evolution of sex, genome maintenance,<br />recombination and extreme stress resistance on different eukaryotic systems,<br />including rotifers, amoeba and Corbicula clams. We are employing different tools<br />(including experimental ecology, population genetics, phylogeny, comparative<br />genomics, transcriptomics, bioinformatics, molecular and cellular biology) to study<br />evolutionary processes at the level of populations, both experimental and natural, and<br />genomes.</p>

<p>Offer<br />We offer a full-time contract for two years. The contract starts between October 2021<br />and December 2021. The position involves no or extremely light teaching load, if the<br />candidate is interested. Salaries are competitive at the European level. The recruited<br />person will benefit from the Belgian social insurance scheme (health care, etc.) without<br />additional expenses.</p>

<p>Profile<br />Applicants are expected to show outstanding commitment to research and must have<br />obtained a PhD by the start of the position. A strong expertise in genomics is required.<br />More specifically, solid competences in bioinformatics (e.g. scripting pipelines) and in<br />genome evolution are needed. Knowledge or interest regarding recombination,<br />metazoan evolution, phylogenomics and population genomics is an added-value.</p>

<p>Application<br />Applications should be submitted via email to karine.van.doninck@ulb.be. The<br />application package should contain the following documents:<br />- A curriculum vitae with the complete list of publications<br />- A cover letter mentioning why the candidate is interested in the position<br />- Minimum 2 recommendation letters<br />Interviews: Interviews will be conducted with the selected candidates. Selected<br />candidates could also be invited to give a seminar to MBE ULB.<br />For any additional information, please contact karine.van.doninck@ulb.be</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/5210/sandelin-group</guid>
  <pubDate>Mon, 30 Sep 2013 19:12:58 -0500</pubDate>
  <link></link>
  <title><![CDATA[Sandelin group]]></title>
  <description><![CDATA[
<p>Sandelin group have a deep interest in most biology, but focus on gene regulation and the many areas that are connected with this, including transcriptomics, epigenetics and technological and informatics aspects.</p>

<p>The group is both computational and experimental.</p>

<p>We ask biological questions to large datasets made using novel genomics techniques, with the help of computers. One of the strengths in the group are the many connections to high-profile experimental laboratories which supply data to be analyzed.</p>

<p>Lab webpage @ http://people.binf.ku.dk/albin/Sandelin_group_at_the_Bioinformatic_Centre/The_Sandelin_group.html</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/5254/mike-ritchie-lab</guid>
  <pubDate>Wed, 02 Oct 2013 15:25:45 -0500</pubDate>
  <link></link>
  <title><![CDATA[Mike Ritchie Lab]]></title>
  <description><![CDATA[
<p>Mike Ritchie Lab primary research focus is the detection of susceptibility genes for common diseases such as cancer, diabetes, hypertension, and cardiovascular disease, among others. The approaches will involve the development and application of new statistical methods with a focus on the detection of gene-gene interactions associated with human disease.</p>

<p>Gene expression and protein expression patterns between normal and non-normal tissues is a growing area of research that may lead to the identification of candidate genes for understanding the etiology of common, complex diseases. </p>

<p>Lab homepage @ http://ritchielab.psu.edu/ritchielab/</p>
]]></description>
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