<?xml version='1.0'?><rss version="2.0" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:georss="http://www.georss.org/georss" xmlns:atom="http://www.w3.org/2005/Atom" >
<channel>
	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/21365?offset=570</link>
	<atom:link href="https://bioinformaticsonline.com/related/21365?offset=570" rel="self" type="application/rss+xml" />
	<description><![CDATA[]]></description>
	
	<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26543/breakseq2</guid>
	<pubDate>Mon, 29 Feb 2016 17:45:38 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26543/breakseq2</link>
	<title><![CDATA[BreakSeq2]]></title>
	<description><![CDATA[<p>Ultrafast and accurate nucleotide-resolution analysis of structural variants</p>
<p>More at http://bioinform.github.io/breakseq2/</p>
<p>Download BreakSeq2</p>
<p>Latest version: https://github.com/bioinform/breakseq2/archive/2.2.tar.gz<br><br>For other versions, see "releases". https://github.com/bioinform/breakseq2/releases</p><p>Address of the bookmark: <a href="http://bioinform.github.io/breakseq2/" rel="nofollow">http://bioinform.github.io/breakseq2/</a></p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26573/efficient-genome-searching-with-biostrings-and-the-bsgenome-data-package</guid>
	<pubDate>Mon, 07 Mar 2016 05:18:06 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26573/efficient-genome-searching-with-biostrings-and-the-bsgenome-data-package</link>
	<title><![CDATA[Efficient genome searching with Biostrings and the BSgenome data package]]></title>
	<description><![CDATA[<p>Address of the bookmark: <a href="https://www.bioconductor.org/packages/3.3/bioc/vignettes/BSgenome/inst/doc/GenomeSearching.pdf" rel="nofollow">https://www.bioconductor.org/packages/3.3/bioc/vignettes/BSgenome/inst/doc/GenomeSearching.pdf</a></p>]]></description>
	<dc:creator>Aasha</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27555/phd-at-institute-of-life-sciences-bhubaneswar</guid>
  <pubDate>Mon, 30 May 2016 03:36:04 -0500</pubDate>
  <link></link>
  <title><![CDATA[PhD at INSTITUTE OF LIFE SCIENCES, Bhubaneswar]]></title>
  <description><![CDATA[
<p>INSTITUTE OF LIFE SCIENCES</p>

<p>Bhubaneswar 751023</p>

<p>Advt No. 07/2016</p>

<p>Institute of Life Sciences (ILS), Bhubaneswar, an autonomous Institute of the Department of Biotechnology, Ministry of Science &amp; Technology, Government of India engaged in advanced research invites applications from Indian nationals for the Ph.D. program. The main focus of the projects will be computational biology in the following areas.</p>

<p>S. No. Area of Research Principal investigator</p>

<p>1. Computational Cancer Biology Dr. Anshuman Dixit</p>

<p>2. Immunogenomics &amp; Systems Biology Dr. Sunil Kumar Raghav</p>

<p>3. Chromatin remodeling and hematopoiesis Dr. Punit Prasad</p>

<p>Candidates are strongly encouraged to visit ILS webpage for detailed information, regarding the research activities of the above mentioned scientists.</p>

<p>Essential Qualifications:</p>

<p>(a) Eligibility: M.Sc., M.V.Sc., M.Pharm., M.S. Pharma. (with NET/GATE/GPAT/BINC/any other equivalent national level exam) or M.Tech with minimum of 60% marks (or equivalent grade point). Those awaiting final result may also apply.</p>

<p>Applications received after the last date will not be accepted. The envelope should clearly be superscribed with “Application for Ph.D. program (computational biology)”. Short-listed candidates selected for the interview will be published in the Institute website (www.ils.res.in).</p>

<p>Application Fees: Applicants except SC/ST candidates are required to send a non-refundable D.D. for Rs.100/- in favour of “Director, Institute of Life Sciences, Bhubaneswar” payable at Bhubaneswar along with duly filled-in application form by the date mentioned below. Director, ILS reserves the right to withdraw the procedure without assigning any reasons thereof.</p>

<p>Important dates: </p>

<p>Last date of receiving applications: 24th June 2016 </p>

<p>Date of display of short-listed candidates and instructions on the Institute website: 30th June 2016 </p>

<p>Date of interview: The interview will be organized on 25th July 2016</p>

<p>Advertisement: https://www.ils.res.in/wp-content/uploads/2016/05/advt07-16.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26852/awesome-bioinformatics-pipelines</guid>
	<pubDate>Wed, 30 Mar 2016 21:50:41 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26852/awesome-bioinformatics-pipelines</link>
	<title><![CDATA[Awesome bioinformatics pipelines !]]></title>
	<description><![CDATA[<p><span>A curated list of awesome pipeline toolkits ...</span></p>
<p><span>https://github.com/pditommaso/awesome-pipeline</span></p><p>Address of the bookmark: <a href="https://github.com/pditommaso/awesome-pipeline" rel="nofollow">https://github.com/pditommaso/awesome-pipeline</a></p>]]></description>
	<dc:creator>Jitendra Prajapati</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27427/rcircos-an-r-package-for-circos-2d-track-plots</guid>
	<pubDate>Fri, 20 May 2016 11:01:13 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27427/rcircos-an-r-package-for-circos-2d-track-plots</link>
	<title><![CDATA[RCircos: an R package for Circos 2D track plots]]></title>
	<description><![CDATA[<p>RCircos package provides a simple and flexible way to make Circos 2D track plots with R and could be easily integrated into other R data processing and graphic manipulation pipelines for presenting large-scale multi-sample genomic research data. It can also serve as a base tool to generate complex Circos images.</p>
<p>More at https://bitbucket.org/henryhzhang/rcircos/src</p><p>Address of the bookmark: <a href="https://bitbucket.org/henryhzhang/rcircos/src" rel="nofollow">https://bitbucket.org/henryhzhang/rcircos/src</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27463/bpipe-a-tool-for-running-and-managing-bioinformatics-pipelines</guid>
	<pubDate>Sat, 21 May 2016 22:42:16 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27463/bpipe-a-tool-for-running-and-managing-bioinformatics-pipelines</link>
	<title><![CDATA[Bpipe - a tool for running and managing bioinformatics pipelines]]></title>
	<description><![CDATA[<p>Bpipe provides a platform for running big bioinformatics jobs that consist of a series of processing stages - known as 'pipelines'.</p>
<ul>
<li>January 20th, 2016 - New! Bpipe 0.9.9 released!</li>
<li>Download <a href="http://download.bpipe.org/versions/bpipe-0.9.9.tar.gz">latest</a>, <a href="http://download.bpipe.org">all</a></li>
<li><a href="http://docs.bpipe.org">Documentation</a></li>
<li><a href="https://groups.google.com/forum/#%21forum/bpipe-discuss">Mailing List</a> (Google Group)</li>
</ul>
<p>Bpipe has been published in <a href="http://bioinformatics.oxfordjournals.org/content/early/2012/04/11/bioinformatics.bts167.abstract">Bioinformatics</a>! If you use Bpipe, please cite:</p>
<p><em>Sadedin S, Pope B &amp; Oshlack A, Bpipe: A Tool for Running and Managing Bioinformatics Pipelines, Bioinformatics</em></p><p>Address of the bookmark: <a href="http://docs.bpipe.org/" rel="nofollow">http://docs.bpipe.org/</a></p>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27465/stand-alone-programs-for-bioinformatician</guid>
	<pubDate>Sat, 21 May 2016 22:50:15 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27465/stand-alone-programs-for-bioinformatician</link>
	<title><![CDATA[Stand-alone programs for Bioinformatician]]></title>
	<description><![CDATA[<p>This directory contains applications for stand-alone use, built specifically for a Linux 64-bit machine.</p>
<p>For help on the bigBed and bigWig applications see:<br>http://genome.ucsc.edu/goldenPath/help/bigBed.html<br>http://genome.ucsc.edu/goldenPath/help/bigWig.html</p>
<p>View the file 'FOOTER' to see the usage statement for each of the applications.</p><p>Address of the bookmark: <a href="http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/" rel="nofollow">http://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/</a></p>]]></description>
	<dc:creator>Radha Agarkar</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27540/research-associate-bioinformatics-at-manit</guid>
  <pubDate>Thu, 26 May 2016 02:20:58 -0500</pubDate>
  <link></link>
  <title><![CDATA[Research Associate Bioinformatics at MANIT]]></title>
  <description><![CDATA[
<p>Research Associate Jobs opportunity in Maulana Azad National Institute of Technology (MANIT) on contract basis<br />Project : “Screening of Anti-venom potential of medicinal plants from Tribal region of Madhya Pradesh"<br />No. of Post : 01</p>

<p>Qualification : The minimum qualifications are : Ph.D in Bioinformatics/ Biotechnology or allied branches with atleast two publication in SCI journals.<br />Fellowship : The consolidated emoluments of Rs.36, 000/ PM+HRA+MA as per CSIR rules.</p>

<p>How to apply<br />Applications (in prescribed attached format and supporting documents) to be received in the Dr. Rahul Shrivastava, Principal Investigator (CSIR Project), Department of Biological Science and Engineering, Maulana Azad National Institute of Technology, Bhopal – 462003 (MP) on or before 7th June 2016.</p>

<p>More at http://www.web.manit.ac.in/Year%202016/Recruitment%20Contract%20Faculty/Biological/Advertisement%20for%20Antivenome%20project%202.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/27685/biodbnet</guid>
	<pubDate>Thu, 02 Jun 2016 11:11:47 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/27685/biodbnet</link>
	<title><![CDATA[BioDBnet]]></title>
	<description><![CDATA[<p><span>Database to Database Conversions</span> </p>
<p>db2db allows for conversions of identifiers from one database to other database identifiers or annotations. To use db2db select the input type of your data, changing the input type automatically changes the output options to the ones specific for the input selected. Then select one or more output types and add your identifiers in the ID list box. Set the remove duplicate values to 'No' if you do not want duplicates to be removed. Clicking on submit then returns a table of your inputs matched against all the outputs selected in the exact order as entered. Results can be limited to a particular taxon by entering it's <a href="https://biodbnet-abcc.ncifcrf.gov/tools/orgTaxon.php">Taxon ID</a>. The performance will vary widely depending on the number of outputs and the options selected. Conversions to a single output with the default options should complete in a few seconds</p><p>Address of the bookmark: <a href="https://biodbnet-abcc.ncifcrf.gov/db/db2db.php" rel="nofollow">https://biodbnet-abcc.ncifcrf.gov/db/db2db.php</a></p>]]></description>
	<dc:creator>Jit</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27701/assistant-professor-bioinformatics-teaching-assistant-at-gujarat-university</guid>
  <pubDate>Sat, 04 Jun 2016 16:04:26 -0500</pubDate>
  <link></link>
  <title><![CDATA[Assistant Professor Bioinformatics / Teaching Assistant at Gujarat University]]></title>
  <description><![CDATA[
<p>Assistant Professor Bioinformatics / Teaching Assistant Jobs recruitment in Gujarat University<br />Departments :</p>

<p>M.Sc. Bioinformatics Climate Change and Impacts Management<br />M.Sc. Biotechnology and Clinical Research</p>

<p>Department of Computer Science (Rollwala Computer Centre)<br />Appointment will be on purely contract basis for 11 months on consolidated salary. Reservation as per rules<br /> <br />How to apply<br />All the candidate are here by required to fill up the application form and given to concern Department, Gujarat University, Ahmedabad (Form can be submitted personally or thorough post/courier.) Candidates are supposed to attach the self attested photocopies of their required testimonials along with application form. Last date of receipt of application is 10/06/2016.</p>

<p>More http://www.gujaratuniversity.org.in/web/NWD/NewsEvents/1700_Recruitments%20at%20Gujarat%20University.asp</p>
]]></description>
</item>

</channel>
</rss>