https://github.com/pditommaso/awesome-pipeline

Address of the bookmark: https://github.com/pditommaso/awesome-pipeline

Essential Qualification:

1. Master's degree in Bioinformatics / Computer Applications / Cognitive Science /Neuroscience/ Neuropsychology or equivalent. (Advantage will be given to NET JRF qualified candidate) Additional

Desirable Skills:

1) Programming skills (e.g., C++, Matlab, Python) 2) Experience/competent in working Window and Linux based programme.

Please mail your CV and covering letter to dr.uttam.kumar@gmail.com.

To know more about lab works please visit http://uttambrainlab.co.in/lab/.

Last date: 15/06/16

Advertisement: http://cbmr.res.in/wp-content/uploads/2016/05/Advertisement-19-5-2016.pdf

• optimized to work with vast amount of data and very large file sets (~ 10,000 - 100,000).
• allows the selective retrieval of only the required files (file masks, ls-lR parsing, recursive search, updates)
• has a built-in repository containing the settings for the most common bioinformatics download needs
• built-in wizard for batch post-processing of downloaded files (archive extraction, file conversion, etc.)
• capable of performing multiple download or update tasks simultaneously

BioDownloader has a built-in repository containing the settings for common bioinformatics file-synchronization needs, including the Protein Data Bank (PDB) and National Center for Biotechnology Information (NCBI) databases. It can post-process downloaded files, including archive extraction and file conversions.

http://dunbrack.fccc.edu/BioDownloader/

Address of the bookmark: http://dunbrack.fccc.edu/BioDownloader/

A walk-in-interview will be held on 15.7.2013 at 12 noon in the Department of Biophysics, Molecular Biology and Bioinformatics, 92 A.P.C Road, Kolkata-700 009 to select one trainee research fellow and two students under DIC. The positions are purely temporary and would be for a period of six months from the date of joining which may be extended by another six months subject to successful performance.

Qualification:

For the Trainee Research Fellow: Should have a master degree in Bioinformatics or allied subjects and should have biological database development experience. Must have at least one publication.

For the Students: Should have a master degree in Bioinformatics or allied subjects and should be proficient in C-programming language. Must be familiar with techniques of Developmental Biology.

The Trainee Research Fellow would be paid a consolidated sum of Rs 10000/- per month and the students would be paid a sum amount Rs. 7000/- per month during the tenure of the project.

Advertisement:
www.caluniv.ac.in/News%20&%20Announcement/trainee_rf_DIC.pdf

Link : http://www-dsv.cea.fr/en/instituts/institut-de-biologie-et-de-technologies-de-saclay-ibitec-s/unites-de-recherche/service-de-biologie-integrative-et-genetique-moleculaire-sbigem/laboratoire-de-biologie-integrative-lbi/presentation__1

Today, refreshing my old memories I decided to blog about the basic knowledge of biochemistry and computational proteomics skills, but after I found several article on internet saying exactly what I had wanted to say I thought I might as well just redirect BOL's blog readers there instead:

Here is the list of website and videos links which provide a good resource for you basic chemistry need:

http://tecreativ.blogspot.co.uk/2012/09/funny-shortcut-remember-periodic-table.html

This blog have some specific hindi word to remember entire periodic table. I really like

Group 14 (C Si Ge Sn Pb) -> Sentence “Chemistry Sir Gives Sanki Problems”

Sanki is a hindi word which mean crazy :P

I found this link useful as well http://www.wikihow.com/Memorise-the-Periodic-Table

The eagle genomics group provide an element of bioinformatics in periodic tables. Yes you got it, this is not periodic table rather bioinformatics tools with periodicals

http://elements.eaglegenomics.com/

You can also try this video links, which provide you an overview with tricks on periodic tables:

http://www.youtube.com/watch?v=fLSfgNxoVGk

http://www.youtube.com/user/periodicvideos

For drug design educational material, software, tools, databses, viewer, file format and many more stuff at one place http://www.allfordrugs.com/drug-design/ I highly recommend you all computational drug designer to bookmark this page for future studies as well.

I just remember one of my mini project in which I use my flash knowledge (flash .. oh ya flash) to explain amino acids in interactive and user friendly manner. I can’t provide It right now, but promise you to provide a link in near future. I hope that you will enjoy my flashy creative skills :).

Moreover, I found some of very interesting tricks to remember all amino acids chemical formulae on youtube at

http://www.youtube.com/watch?v=gqrWb0fmzQ&list=PL6132651E70BB5575

http://www.youtube.com/watch?v=C2GfoGXfySQ&list=PL6132651E70BB5575

Key points for computer added drug designers?
1. A shortage of biochemistry skills means that you absolutely nowhere in understanding the key concept and do research.
2. Keep handy with complex mathematical formula, before merely running tools or software.
3. Dig it better and deeper guys .. design it.

Kindly log on to conference website http://rgcb.res.in/IACR2014 for further details and timely updates and registration. We shall truly appreciate if the same be circulated among your friends, scholars and students encouraging them to participate in the meet.

http://210.212.237.38/iacrconference/

Software; Creation of Public Domain Resources in Biology
Present Status::

Developing prediction methods for gene, beta-turn, secondary structure and MHC-binding sites.
Area of Interest ::

Comparison of force field simulations. Analysis of DNA-protein interactions using molecular mechanics methods.Drug Target Identification using in silico biology.

More @ http://www.imtech.res.in/bic/index.php?option=com_content&view=article&id=65

PIs: http://www.imtech.res.in/bic/index.php?option=com_content&view=article&id=69

The Taverna suite is written in Java and includes the Taverna Engine(used for enacting workflows) that powers both the Taverna Workbench(the desktop client application) and the Taverna Server (which allows remote execution of workflows). Taverna is also available as a Command Line Tool for a quick execution of workflows from a terminal.

Address of the bookmark: http://www.taverna.org.uk/

Gargi believes in its mission statement that every student who passes through the portals of the college emerges as a wholly developed individual symbolizing the spirit of enterprise and inquiry that characterizes Gargi.

Bioinformatics Infrastructure Facility (BIF), Gargi College, University of Delhi invites candidates for filling up the following purely temporary positions sponsored by DBT, New Delhi.

1. Name of the post: Traineeship
Essential Qualification: Post Graduate degree in Bioinformatics or any other branch of Life Sciences preferably with dissertation in Bioinformatics.
Desirable Qualification: Prior knowledge of programming languages such as C, VB, SQL etc. and software/database development.

2. Name of the post: Research Associate
Essential Qualification: PhD in Bioinformatics/Biological Sciences/Computer Science or allied sciences with proven experience in bioinformatics.

3. Name of the post: Studentship
Essential Qualifications: Final year Post Graduate students pursuing a degree in Bioinformatics or any branch of Life Science with knowledge of bioinformatics.

How to apply:
Interested candidates are required to appear for the walk in interview on 29th Aug, 2013 at 10.00 AM in Principal’s Office, Gargi College, Sirifort Road, N. Delhi-110049, with their CVs, original documents and a set of Photostat copies of all original documents.

http://www.du.ac.in/fileadmin/DU/students/Pdf/du/advt/2013/16082013_Gargi_RAplus2_Advt.pdf