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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/2492?offset=60</link>
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	<description><![CDATA[]]></description>
	
	
<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/18579/cluster-innovation-center-university-of-delhi</guid>
  <pubDate>Wed, 22 Oct 2014 10:39:49 -0500</pubDate>
  <link></link>
  <title><![CDATA[CLUSTER INNOVATION CENTER @ UNIVERSITY OF DELHI]]></title>
  <description><![CDATA[
<p>Applications for Pre-selection of  candidates under ‘Institutions Mode’ for DST-ISPIRE Faculty in  Computational Biology/ Systems Biology/ Bioinformatics</p>

<p>Applications are invited for pre-selection  of candidates for Ministry of Science and Technology, Department of Science and Technology INSPIRE Faculty Scheme: a component of “Assured Opportunity for Research Career (AORC)” under INSPIRE in the area of computational Biology/Systems Biology/Bioinformatics.</p>

<p>Candidates having done their B.Tech/B.E.  and or M.Sc./M.Tech in Computer Science or Biotechnology and Ph.D. in Systems/ Computational Biology or Bioinformatics may apply in the following format prescribed by DST to the Director, Cluster Innovation Center, University Stadium, GC Narang Marg, University of Delhi, Delhi -11107. Detials of other qualification, age limits etc., please visit www.inspire-dst.gov.in.</p>

<p>Application on the prescribed format may be submitted by email to director@cic.du.ac.in before October 25, 2014. Selected candidates shall be called for an interview. The date, time and venue of the interview shall be informed by email/telephone. For more information about Cluster Innovation Center, please visit https://ducic.ac.in.</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/22410/nicolas-corradi-lab</guid>
  <pubDate>Tue, 26 May 2015 16:19:02 -0500</pubDate>
  <link></link>
  <title><![CDATA[Nicolas Corradi Lab]]></title>
  <description><![CDATA[
<p>The goal of our research is to better understand the biology of microbial organisms of significant ecological, veterinary and medical importance.<br />To achieve this goal, our team combines the power of next generation DNA sequencing and  bioinformatics with molecular biology and experimental procedures.</p>

<p>Main research topics:<br />- Comparative and Population Genomics of Plant Symbionts<br />- Parasite Genome Evolution<br />- Experimental Evolution of Microbial Symbionts and Parasites<br />- Phylogenomics of Early Branching Fungi</p>

<p>More at http://corradilab.weebly.com/</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/26332/pilon</guid>
	<pubDate>Mon, 08 Feb 2016 15:56:18 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/26332/pilon</link>
	<title><![CDATA[Pilon]]></title>
	<description><![CDATA[<p>Pilon is a software tool which can be used to:</p>
<ul>
<li>Automatically improve draft assemblies</li>
<li>Find variation among strains, including large event detection</li>
</ul>
<p>Pilon requires as input a FASTA file of the genome along with one or more BAM files of reads aligned to the input FASTA file. Pilon uses read alignment analysis to identify inconsistencies between the input genome and the evidence in the reads. It then attempts to make improvements to the input genome, including:</p>
<ul>
<li>Single base differences</li>
<li>Small indels</li>
<li>Larger indel or block substitution events</li>
<li>Gap filling</li>
<li>Identification of local misassemblies, including optional opening of new gaps</li>
</ul>
<p>More at https://github.com/broadinstitute/pilon/wiki</p><p>Address of the bookmark: <a href="https://github.com/broadinstitute/pilon/wiki" rel="nofollow">https://github.com/broadinstitute/pilon/wiki</a></p>]]></description>
	<dc:creator>Rahul Nayak</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/1514/list-of-pharmacogenomics-companies-worldwide</guid>
	<pubDate>Fri, 09 Aug 2013 13:24:47 -0500</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/1514/list-of-pharmacogenomics-companies-worldwide</link>
	<title><![CDATA[List of pharmacogenomics companies worldwide]]></title>
	<description><![CDATA[<div><div><p>Pharmacogenomics are the most promising area of research. Here is the list of some Pharmacogenomics companies worldwide. Feel free to add more pharmacogenomics companies if not mentioned in here.</p><p>Great Pharmacogenomics companies <br /><a href="http://www.aruplab.com/">www.aruplab.com</a> <br /><a href="http://www.clarientinc.com/">www.clarientinc.com</a> <br /><a href="http://www.cns-hts.com/">www.cns-hts.com</a> <br /><a href="http://www.dnanow.com/">www.dnanow.com</a> <br /><a href="http://www.dnavision.be/">www.dnavision.be</a> <br /><a href="http://www.dnavision.com/">www.dnavision.com</a> <br /><a href="http://www.dxsdiagnostics.com/">www.dxsdiagnostics.com</a> <br /><a href="http://www.entrogen.com/">www.entrogen.com</a> <br /><a href="http://www.exiqon.com/">www.exiqon.com</a> <br /><a href="http://www.gene.com/">www.gene.com</a> <br /><a href="http://www.genomichealth.com/">www.genomichealth.com</a> <br /><a href="http://www.genoptix.com/">www.genoptix.com</a> <br /><a href="http://www.genpathdiagnostics.com/">www.genpathdiagnostics.com</a> <br /><a href="http://www.gentris.com/">www.gentris.com</a> <br /><a href="http://www.immunicon.com/">www.immunicon.com</a> <br /><a href="http://www.ingenuity.com/">www.ingenuity.com</a> <br /><a href="http://www.lab21.com/">www.lab21.com</a> <br /><a href="http://www.labcorp.com/">www.labcorp.com</a> <br /><a href="http://www.lion-ag.de/">www.lion-ag.de</a> <br /><a href="http://www.lynxgen.com/">www.lynxgen.com</a> <br /><a href="http://www.mayoclinic.com/">www.mayoclinic.com</a> <br /><a href="http://www.mesoscale.com/">www.mesoscale.com</a> <br /><a href="http://www.microcide.com/">www.microcide.com</a> <br /><a href="http://www.mitokor.com/">www.mitokor.com </a> <br /><a href="http://www.monarchlifesciences.com/">www.monarchlifesciences.com</a> <br /><a href="http://www.mplnet.com/">www.mplnet.com</a> <br /><a href="http://www.orchidbio.com/">www.orchidbio.com</a> <br /><a href="http://www.pebio.com/">www.pebio.com</a> <br /><a href="http://www.phenomenome.com/">www.phenomenome.com</a> <br /><a href="http://www.phenopath.com/">www.phenopath.com</a> <br /><a href="http://www.ppgx.com/">www.ppgx.com</a> <br /><a href="http://www.prometheuslabs.com/">www.prometheuslabs.com</a> <br /><a href="http://www.protogene.com/">www.protogene.com</a> <br /><a href="http://www.questdiagnostics.com/">www.questdiagnostics.com</a> <br /><a href="http://www.rigelinc.com/">www.rigelinc.com</a> <br /><a href="http://www.rii.com/">www.rii.com</a> <br /><a href="http://www.saladax.com/">www.saladax.com</a> <br /><a href="http://www.tmdlab.com/">www.tmdlab.com</a> <br /><a href="http://www.transgenomic.com/">www.transgenomic.com</a> <br /><a href="http://www.twt.com/">www.twt.com</a> <br /><a href="http://www.uslabs.net/">www.uslabs.net</a> <br /><a href="http://www.variagenics.com/">www.variagenics.com</a> <br /><br />Great Equipment Companies for Genomics <br /><a href="http://www.affymetrix.com/">www.affymetrix.com</a> <br /><a href="http://www.illumina.com/">www.illumina.com</a> <br /><a href="http://www.iontorrent.com/">www.iontorrent.com</a> <br /><a href="http://www.sequenom.com/">www.sequenom.com</a> <br /><a href="http://www.appliedbiosystems.com/">www.appliedbiosystems.com</a> <br /><a href="http://www.454.com/">www.454.com</a> <br /><a href="http://www.appliedbiosystems.com/">www.appliedbiosystems.com</a><br /><br />Genomics in India <br /><a href="http://www.ganitlabs.in/">www.ganitlabs.in</a> <br /><a href="http://www.sandor.co.in/">www.sandor.co.in</a> <br /><a href="http://www.igib.res.in/">www.igib.res.in</a> <br /><a href="http://www.genotypic.co.in/">www.genotypic.co.in</a> <br /><a href="http://www.ocimumbio.com/">www.ocimumbio.com</a> <br /><a href="http://www.abcgenomics.com/">www.abcgenomics.com</a> <br /><a href="http://www.xcelrisgenomics.com/">www.xcelrisgenomics.com</a> <br /><a href="http://www.ayugen.com/">www.ayugen.com</a> <br /><a href="http://www.geneombiotech.com/">www.geneombiotech.com</a> <br /><br /> Large Global Whole Genome Companies <br /><a href="http://www.decode.com/">www.decode.com</a> <br /><a href="http://www.23andme.com/">www.23andme.com</a> <br /><a href="http://www.navigenics.com/">www.navigenics.com</a><br />www.pathway.com<br /><br /> Global companies offering genomics services <br /><a href="http://www.asuragen.com/">www.asuragen.com</a> <br /><a href="http://www.baseclear.com/">www.baseclear.com</a> <br /><a href="http://www.agtcenter.com/">www.agtcenter.com</a> <br /><a href="http://www.ambrygen.com/">www.ambrygen.com</a> <br /><a href="http://www.arosab.com/">www.arosab.com</a> <br /><a href="http://www.agrf.org.au/">www.agrf.org.au</a> <br /><a href="http://www.beckmangenomics.com/">www.beckmangenomics.com</a> <br /><a href="http://www.genomics.cn/">www.genomics.cn</a> <br /><a href="http://www.bsf.a-star.edu.sg/">www.bsf.a-star.edu.sg</a> <br /><a href="http://www.cbm.fvg.it/">www.cbm.fvg.it</a> <br /><a href="http://www.cincinnatichildrens.org/">www.cincinnatichildrens.org</a> <br /><a href="http://www.cofactorgenomics.com/">www.cofactorgenomics.com</a> <br /><a href="http://www.covance.com/">www.covance.com</a> <br /><a href="http://www.dnalandmarks.ca/">www.dnalandmarks.ca</a> <br /><a href="http://www.dnavision.com/">www.dnavision.com</a> <br /><a href="http://www.expressionanalysis.com/">www.expressionanalysis.com</a> <br /><a href="http://www.fasteris.com/">www.fasteris.com</a> <br /><a href="http://www.gatc-biotech.com/">www.gatc-biotech.com</a> <br /><a href="http://www.genesdiffusion.com/">www.genesdiffusion.com</a> <br /><a href="http://www.geneseek.com/">www.geneseek.com</a> <br /><a href="http://www.geneticvisions.com/">www.geneticvisions.com</a> <br /><a href="http://www.geneworks.com.au/">www.geneworks.com.au</a> <br /><a href="http://www.genizon.com/">www.genizon.com</a> <br /><a href="http://www.genoskan.dk/uk">www.genoskan.dk/uk</a> <br /><a href="http://www.gpbio.jp/">www.gpbio.jp</a> <br /><a href="http://www.igatechnology.com/">www.igatechnology.com</a> <br /><a href="http://www.igenixinc.com/">www.igenixinc.com</a> <br /><a href="http://www.auxologico.it/">www.auxologico.it</a> <br /><a href="http://www.lifeandbrain.com/">www.lifeandbrain.com</a> <br /><a href="http://www.macrogen.co.kr/eng">www.macrogen.co.kr/eng</a> <br /><a href="http://www.gqinnovationcenter.com/">www.gqinnovationcenter.com</a> <br /><a href="http://www.mftservices.de/">www.mftservices.de</a> <br /><a href="http://www.ncgr.org/">www.ncgr.org</a> <br /><a href="http://www.ramaciotti.unsw.edu.au/">www.ramaciotti.unsw.edu.au</a> <br /><a href="http://www.rikengenesis.jp/">www.rikengenesis.jp</a> <br /><a href="http://www.sabiosciences.com/">www.SABiosciences.com</a> <br /><a href="http://www.sequensysbio.com/">www.sequensysbio.com</a> <br /><a href="http://www.servicexs.com/">www.servicexs.com</a> <br /><a href="http://www.snp-genetics.com/">www.snp-genetics.com</a> <br /><a href="http://www.takara-bio.com/">www.takara-bio.com</a> <br /><a href="http://www.gen-probe.com/">www.gen-probe.com</a> <br /><a href="http://www.traitgenetics.com/">www.traitgenetics.com</a></p></div></div>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/2423/cancers-origins-revealed</guid>
	<pubDate>Thu, 15 Aug 2013 13:06:56 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/2423/cancers-origins-revealed</link>
	<title><![CDATA[Cancer's origins revealed]]></title>
	<description><![CDATA[<p>Researchers have provided the first comprehensive compendium of mutational processes that drive tumour development. Together, these mutational processes explain most mutations found in 30 of the most common cancer types. This new understanding of cancer development could help to treat and prevent a wide-range of cancers.<br /><br />More at &gt;&gt; http://www.sanger.ac.uk/about/press/2013/130814.html</p>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/43272/bioinformatics-head-bioinformatics-manager-iii-cancer-genomics-research-laboratory-at-frederick-national-laboratory</guid>
  <pubDate>Wed, 18 Aug 2021 00:19:48 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Head (Bioinformatics Manager III), Cancer Genomics Research Laboratory at  Frederick National Laboratory]]></title>
  <description><![CDATA[
<p>Frederick National Laboratory seeking an enthusiastic, creative, and seasoned bioinformatics professional to join our leadership team and direct the exceptional Bioinformatics Group at the Cancer Genomics Research Laboratory (CGR).  CGR has a diverse team of bioinformatics and computational scientists that support all areas of bioinformatics and data analysis (infrastructure, data QC, pipeline development and maintenance, data curation and sharing, methodology development, statistical analyses, machine learning approaches, and scientific interpretation).</p>

<p>More at https://leidosbiomed.csod.com/ats/careersite/jobdetails.aspx?site=4&amp;c=leidosbiomed&amp;id=2040</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/5422/shendure-lab</guid>
  <pubDate>Wed, 09 Oct 2013 14:21:58 -0500</pubDate>
  <link></link>
  <title><![CDATA[Shendure Lab]]></title>
  <description><![CDATA[
<p>The Shendure Lab is part of the Department of Genome Sciences at the University of Washington (Seattle, WA). The mission of the lab is to develop and apply new technologies in genomics and molecular biology. Most projects in the lab exploit new DNA sequencing technologies (Shendure et al., Nature Reviews Genetics 2004; Shendure &amp; Ji, Nature Biotechnology 2008; Shendure &amp; Lieberman Aiden, Nature Biotechnology 2012), and generally fall into one of six areas: 1) next-generation human genetics; 2) genome contiguity &amp; completeness; 3) massively parallel functional analysis; 4) molecular tagging; 5) synthetic biology; 6) translational genomics. Our interests in each of these areas are outlined briefly below, and a full list of publications is available via PubMed. http://www.ncbi.nlm.nih.gov/pubmed?cmd=search&amp;term=shendure<br />More http://krishna.gs.washington.edu/research.html</p>

<p>Lab page @ http://krishna.gs.washington.edu/index.html</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/5661/shankar-lab</guid>
  <pubDate>Wed, 16 Oct 2013 07:02:22 -0500</pubDate>
  <link></link>
  <title><![CDATA[Shankar Lab]]></title>
  <description><![CDATA[
<p>Research Interest:</p>

<p>(A) Regulatory System Analysis with respect to microRNAs</p>

<p>(B) Computational Epigenomics &amp; Regulomics:</p>

<p>(C) Computational issues with Next Generation Sequencing:</p>

<p>Department of Biotechnology, <br />Institute of Himalyan Bioresources Technology<br />CSIR, Palampur(Himachal Pradesh), India.<br />Email: ravishihbt.res.in; ravish9gmail.com</p>

<p>More @ http://scbb.ihbt.res.in/SCBB_dept/Lab_Member.php</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/5747/dbbrowser-attwood-lab</guid>
  <pubDate>Fri, 18 Oct 2013 10:48:19 -0500</pubDate>
  <link></link>
  <title><![CDATA[DbBrowser: Attwood Lab]]></title>
  <description><![CDATA[
<p>DbBrowser: Attwood Lab research concerns protein sequence analysis, primarily using the method of protein 'fingerprinting'. DbBrowser: Attwood Lab maintain a diagnostic fingerprint database (PRINTS), one of the founding partner of InterPro. We also design software to display sequence and structural data in visually-striking ways (e.g., Ambrosia, CINEMA); DbBrowser: Attwood Lab are building re-usable software components to create semantically integrated bioinformatics applications through UTOPIA, including a 'smart' PDF reader that links bioinformatics databases and tools directly with scientific articles (Utopia Documents); and have developed a number of tools for automatic annotation and text mining (e.g., MINOTAUR, PRECIS, METIS). </p>

<p>More @ http://www.bioinf.manchester.ac.uk/dbbrowser/index.php</p>
]]></description>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/6233/edwards-lab</guid>
  <pubDate>Sun, 10 Nov 2013 15:07:08 -0600</pubDate>
  <link></link>
  <title><![CDATA[Edwards Lab]]></title>
  <description><![CDATA[
<p>We study the evolutionary biology of birds and relatives, combining field, museum and genomics approaches to understand the basis of avian diversity, evolution and behavior. Our guiding approaches include population genetics, which provides a quantitative framework for studying speciation, geographic variation and genome evolution; systematics, which acknowledges that the focal species of any study has relatives that are behaviorally and ecologically no less interesting; and natural history, which gives meaning to the genes and genomic patterns we study.</p>

<p>Lab page: http://www.oeb.harvard.edu/faculty/edwards/index.html</p>
]]></description>
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