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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/26303?offset=1070</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/21685/uiar-short-term-trainingfinal-year-dissertation-project-in-life-sciencesbioinformaticsbiotech</guid>
  <pubDate>Mon, 16 Mar 2015 23:56:25 -0500</pubDate>
  <link></link>
  <title><![CDATA[UIAR Short-Term Training/Final Year Dissertation Project in Life Sciences/Bioinformatics/Biotech]]></title>
  <description><![CDATA[
<p>Short-term training/Final year dissertation project</p>

<p>Candidates desirous of doing a short-term training / final year dissertation project for MSc (Life Sciences/Bioinformatics/Biotechnology or any science discipline) at UIAR Biophysics and Bioinformatics department may please drop an email atanju@iiar.res.in along with their resume.</p>

<p>Selected candidates will be further intimated. There will be a fees charged for doing the project at UIAR. The projects will be experimental or computational or involve both.</p>

<p>The training scope will be in the following areas but not limited to:</p>

<p>Bioinformatics analysis, Docking and Virtual screening, Molecular Dynamics simulation, Cloning, expression and purification of proteins, Biophysical and Biochemical characterisation of proteins, Crystallization and Structural Studies.</p>

<p>Advertisement: www.iiar.res.in/?q=node/450</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/4220/cv-of-dr-pranjal-chandra</guid>
	<pubDate>Wed, 04 Sep 2013 11:15:25 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/4220/cv-of-dr-pranjal-chandra</link>
	<title><![CDATA[CV of Dr. Pranjal Chandra]]></title>
	<description><![CDATA[]]></description>
	<dc:creator>Pranjal Chandra PhD</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/4220" length="394752" type="application/msword" />
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/file/view/14868/bioinformaticians-summer-vacation</guid>
	<pubDate>Wed, 03 Sep 2014 13:11:50 -0500</pubDate>
	<link>https://bioinformaticsonline.com/file/view/14868/bioinformaticians-summer-vacation</link>
	<title><![CDATA[Bioinformatician&#039;s summer vacation !!!]]></title>
	<description><![CDATA[<p>Yes, the bioinformatician do spend their summer vacation like this. They spend more time on cheking the JOBS running on various servers.</p>]]></description>
	<dc:creator>Jit</dc:creator>
	<enclosure url="https://bioinformaticsonline.com/file/download/14868" length="638462" type="image/png" />
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/36647/bioinformatics-jobs-at-nibmg</guid>
  <pubDate>Wed, 16 May 2018 02:57:15 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics jobs at NIBMG]]></title>
  <description><![CDATA[
<p>NIBMG are looking for bright and motivated people in our big projects on cutting edge biomedical genomics research</p>

<p>http://www.nibmg.ac.in/academic/SyMeC-ICGC/SyMeC%20&amp;%20ICGC_May%202018.pdf</p>

<p>http://www.nibmg.ac.in/academic/plp/15_05_2018/AdvertisementMay2018.pdf</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/41689/medaka-sequence-correction-provided-by-ont-research</guid>
	<pubDate>Mon, 18 May 2020 16:28:00 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/41689/medaka-sequence-correction-provided-by-ont-research</link>
	<title><![CDATA[medaka: Sequence correction provided by ONT Research]]></title>
	<description><![CDATA[<p><code>medaka</code><span>&nbsp;is a tool to create a consensus sequence from nanopore sequencing data. This task is performed using neural networks applied from a pileup of individual sequencing reads against a draft assembly. It outperforms graph-based methods operating on basecalled data, and can be competitive with state-of-the-art signal-based methods, whilst being much faster.</span></p><p>Address of the bookmark: <a href="https://github.com/nanoporetech/medaka" rel="nofollow">https://github.com/nanoporetech/medaka</a></p>]]></description>
	<dc:creator>BioStar</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/45140/integration-of-speciation-research-workshop-announcement</guid>
  <pubDate>Tue, 28 Apr 2026 07:07:57 -0500</pubDate>
  <link></link>
  <title><![CDATA[Integration Of Speciation Research : Workshop Announcement]]></title>
  <description><![CDATA[
<p>We are excited to share that the ESEB- funded special topic network Integration Of Speciation Research (IOS - https://speciation-network.pages.ist.ac.at/) is hosting a second in-person workshop from 7â€“11 December 2026 at the Scottish Centre for Ecology &amp; the Natural Environment (Glasgow, UK - https://www.gla.ac.uk/research/az/scene/).</p>

<p>This workshop is aimed at bringing together ~40 diverse speciation researchers:</p>

<p>-  to collaborate on populating a database of published reproductive barriers based on a standardized RIO framework (https://ecoevorxiv.org/repository/view/10083/). This will involve working through papers during the workshop to extract RI measures and other metadata and entering them into a draft database (some preparatory work before the workshop may be requested to facilitate these steps during the workshop)</p>

<p>- to start working towards a manuscript using this database to answer an outstanding question in speciation</p>

<p>- to network, learn about reproductive isolation, and have fun!</p>

<p>If you are interested in applying to participate in the workshop, please fill out the form in the link below by ** May 20th **. Room &amp; board will be covered by the organizers; all other travel costs are the responsibility of the attendee.</p>

<p>Application link:</p>

<p>https://docs.google.com/forms/d/e/1FAIpQLSenAMqSdZjeRmKEDtBNa5tpjPn7IukPyT5BzfZ4JMpIk2YOEw/viewform</p>

<p>The previous IOS workshop was held in Finland in 2023 (see more details at https://speciation-network.pages.ist.ac.at/workshops) and resulted in new interactions between speciation researchers and the successful publication of an Integration of Speciation research manuscript  (https://academic.oup.com/evolinnean/article/3/1/kzae001/7609448).</p>

<p>We look forward to seeing you in Glasgow!</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/news/view/42023/encode3-a-collection-of-research-articles-and-related-content-describing-the-encyclopedia-of-dna-elements-its-datasets-and-tools</guid>
	<pubDate>Sat, 08 Aug 2020 08:25:21 -0500</pubDate>
	<link>https://bioinformaticsonline.com/news/view/42023/encode3-a-collection-of-research-articles-and-related-content-describing-the-encyclopedia-of-dna-elements-its-datasets-and-tools</link>
	<title><![CDATA[ENCODE3: A collection of research articles and related content describing the Encyclopedia of DNA Elements, its datasets and tools.]]></title>
	<description><![CDATA[<p>How cells, tissues and organisms interpret the information encoded in the genome has vital implications for our understanding of development, health and disease. Launched in 2003, the ENCyclopedia Of DNA Elements (ENCODE) project has the aim of mapping the functional elements in the human genome (later expanded to include model organisms).</p><p>During the first phase of ENCODE, published in 2007, microarray-based technologies were used to detect regions associated with transcription factors, certain histone modifications and open chromatin within a pre-specified 1% of the human genome.</p><p>ENCODE&rsquo;s second phase saw a switch to sequencing-based technologies, the addition of new assay types and the analysis of functional elements genome-wide, described in a collection of research articles in 2012.</p><p><span>The&nbsp;</span><a href="https://www.nature.com/articles/s41586-020-2493-4">Encyclopedia paper of ENCODE 3</a><span>, published in&nbsp;</span><em>Nature</em><span>, gives an overview of the various assays that were performed in human and mouse cell lines and tissues and describes a Registry of human and mouse candidate&nbsp;</span><em>cis</em><span>-regulatory elements (cCREs).</span></p><p>More at&nbsp;<a href="https://www.nature.com/immersive/d42859-020-00027-2/index.html">https://www.nature.com/immersive/d42859-020-00027-2/index.html</a></p>]]></description>
	<dc:creator>Shruti Paniwala</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/24178/essentials-of-statistics-and-data-analysis-using-r</guid>
  <pubDate>Mon, 31 Aug 2015 01:32:12 -0500</pubDate>
  <link></link>
  <title><![CDATA[Essentials of Statistics and Data Analysis using R]]></title>
  <description><![CDATA[
<p>Clinical Development Services Agency (CDSA) is an extramural unit of Translational Health Science and Technology Institute (THSTI), Department of Biotechnology, Ministry of Science &amp; Technology, Government of India. CDSA has a national mandate of strengthening capacity and capability building in the area of Clinical development and Translational Research.</p>

<p>CDSA is pleased to announce a 4 days hands-on training program on “Essentials of Statistics and Data Analysis using R” at ICGEB, Aruna Asaf Ali Road, New Delhi on December 1 – 4, 2015. This will involve developing and enhancing skills to understand basic principles of statistics for summarizing data and use of appropriate statistical tests as well as providing an understanding of data analysis using R. Didactic lectures with practical sessions will be delivered by experienced faculties from AIIMS and Novartis. Live classroom with power point presentations, case studies, mock exercise, practical sessions on R, group work with time for discussion and Q&amp;A sessions are added advantages of this workshop.</p>

<p>Please contact gayatrivishwakarma.cdsa@thsti.res.in or vineetabaloni.cdsa@thsti.res.in for program and registration details.</p>

<p>Please nominate personage or register yourself on or before November 6, 2015 along with the electronic transfer of registration fee.</p>
]]></description>
</item>
<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/31278/metapred2cs</guid>
	<pubDate>Fri, 03 Mar 2017 05:15:07 -0600</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/31278/metapred2cs</link>
	<title><![CDATA[MetaPred2CS]]></title>
	<description><![CDATA[<p style="text-align: justify;"><strong>MetaPred2CS Web server&nbsp;</strong>is a meta-predictor based on&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/17160063">Support Vector Machine (SVM)</a>&nbsp;that combines 6 individual sequence based protein-protein interaction prediction methods to predict&nbsp;<strong>prokaryotic two-component system&nbsp;</strong>protein-protein interactions (PPIs). The methods implemented in MetaPred2CS are 2 co-evolutionary methods:&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/11933068">in-silico two hybrid (i2h)</a>&nbsp;and&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/11707606">mirror tree (MT)</a>&nbsp;methods and 4 genomics context based methods:&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/15947018">phylogenetic profiling (PP)</a>,&nbsp;<a href="http://www.ncbi.nlm.nih.gov/pubmed/10573422">gene fusion (GF)</a>,&nbsp;<a href="http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.0030043">gene neighbourhood (GN)</a>&nbsp;and and&nbsp;<a href="http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.0030043">gene operon methods (GO)</a>.</p>
<p>&nbsp;http://metapred2cs.ibers.aber.ac.uk/</p><p>Address of the bookmark: <a href="https://github.com/martinjvickers/MetaPred2CS" rel="nofollow">https://github.com/martinjvickers/MetaPred2CS</a></p>]]></description>
	<dc:creator>Manisha Mishra</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/27253/ra-bioinformatics-at-jnu-delhi</guid>
  <pubDate>Tue, 10 May 2016 01:50:38 -0500</pubDate>
  <link></link>
  <title><![CDATA[R.A Bioinformatics at JNU, Delhi]]></title>
  <description><![CDATA[
<p>R.A Jobs opportunity in Jawaharlal Nehru University (JNU) on purely temporary basis</p>

<p>Project Title : "Structural and functional characterization of serine biosynthetic pathway enzymes from Entamoeba histolytica"</p>

<p>No. of Post : 01</p>

<p>Qualification : Ph.D in any computational biology / bioinformatics</p>

<p>Desirable : 1. Experience with docking, simulations and structural biology with proof of publications is preferred. 2. National Eligibility Test cleared [CSIR/UGC] candidate is preferred.</p>

<p>Salary : According to CSIR rules<br />How to apply</p>

<p>The application on plain paper indicating name, date of birth/age, address, essential/technical/professional qualifications. experience, list of publications should reach The Prof. S. Gourinath, Principal Investigator, [Project Director], School of Life Sciences, Jawaharlal Nehru University, New Delhi-110067, on or before 23rd May 2016.</p>

<p>More at http://www.jnu.ac.in/Career/currentjobs.htm</p>
]]></description>
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