http://meme-suite.org/ - Motif based sequence analysis suits
The MEME Suite allows the biologist to discover novel motifs in collections of unaligned nucleotide or protein sequences, and to perform a wide variety of other motif-based analyses.
The MEME Suite...
www.ncbi.nlm.nih.gov - YAHA, a fast and flexible hash-based aligner. YAHA is as fast and accurate as BWA-SW at finding the single best alignment per query and is dramatically faster and more sensitive than both SSAHA2 and MegaBLAST at finding all possible alignments....
www.mgc.ac.cn - GenomeComp is a tool for summarizing, parsing and visualizing the genome wide sequence comparison results derived from voluminous BLAST textual output, so as to locate the rearrangements, insertions or deletions of genome segments between species or...
github.com - Krona allows hierarchical data to be explored with zooming, multi-layered pie charts. Krona charts can be created using an Excel template or KronaTools, which includes support for several bioinformatics tools and raw data formats. The interactive...
github.com - TMAP - torrent mapping alignment program General Notes
TMAP is a fast and accurate alignment software for short and long nucleotide sequences produced by next-generation sequencing technologies.
The latest TMAP is unsupported. To use a...
wgs-assembler.sourceforge.net - These are release notes for Celera Assembler version 8.3rc2, which was released on May 24, 2015.This distribution package provides a stable, tested, documented version of the software. The distribution is usable on most Unix-like platforms,...
Researcher in Computer Science at the Computational Biology Unit - temporary employment
The Department of Informatics is a vacant position as a researcher in computer science, related to Computational Biology Unit (CBU), for 3 years.
The...
en.wikipedia.org - FASTQ format is a text-based format for storing both a biological sequence (usually nucleotide sequence) and its corresponding quality scores. Both the sequence letter and quality score are each encoded with a...
BIOINFORMATICS POSTDOC IN FUNCTIONAL EVOLUTIONARY GENOMICS
Center for Integrative Genomics, University of Lausanne, Switzerland
Two postdoctoral positions (2 years with possible extensions up to 5 years) are available immediately in the...