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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/26752?offset=1220</link>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/44294/opportunity-at-mcdermott-center-bioinformatics-lab</guid>
  <pubDate>Sat, 01 Apr 2023 09:56:39 -0500</pubDate>
  <link></link>
  <title><![CDATA[Opportunity at McDermott Center Bioinformatics Lab]]></title>
  <description><![CDATA[
<p>Our team, composed of experts from diverse backgrounds including genetics, cancer biology, computer science, bioinformatics, and microbiology, stays current with evolving bioinformatics techniques. We offer consulting, customized service, and collaboration opportunities. We suggest visiting us to discuss your experiment design and results, as we can tailor our assistance to meet your specific research goals.</p>

<p>https://labs.utsouthwestern.edu/bioinformatics-lab/positions</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/view/2023</guid>
	<pubDate>Mon, 12 Aug 2013 09:36:53 -0500</pubDate>
	<link>https://bioinformaticsonline.com/view/2023</link>
	<title><![CDATA[What is the objective of BINC examination?]]></title>
	<description><![CDATA[<p>I personally did not understand the objective behind BINC examination. Is government only try to show off that they are doing something to promote Indian bioinformatics sector?</p><p>Moreover, It looks like BINC indirectly putting&nbsp;an extra burden to bioinformatician, mentally and financially.</p>]]></description>
	<dc:creator>Neel</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44624/bioinformatics-workshops</guid>
	<pubDate>Wed, 31 Jul 2024 02:16:53 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44624/bioinformatics-workshops</link>
	<title><![CDATA[Bioinformatics Workshops !]]></title>
	<description><![CDATA[<p>When delving into bioinformatics, having access to reliable resources is crucial for effective research and analysis. Key online resources include the National Center for Biotechnology Information (NCBI), which offers tools like BLAST for sequence alignment and comprehensive gene databases. For presentations and educational materials, exploring SlideShare for introductory and advanced bioinformatics topics can provide valuable insights and learning aids.</p>
<p>https://evomics.org/2024-workshop-on-genomics/</p><p>Address of the bookmark: <a href="https://evomics.org/2024-workshop-on-genomics/" rel="nofollow">https://evomics.org/2024-workshop-on-genomics/</a></p>]]></description>
	<dc:creator>Abhi</dc:creator>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2425/phd-fellowship-computational-biologybioinformatics-cork-ireland-cork-ireland</guid>
  <pubDate>Thu, 15 Aug 2013 14:09:00 -0500</pubDate>
  <link></link>
  <title><![CDATA[Ph.D. Fellowship (Computational Biology/Bioinformatics) : Cork, Ireland : Cork, Ireland]]></title>
  <description><![CDATA[
<p>Ph.D. Fellowship (18,000 euro/pa, plus tuition fees at the EU students rate) is available for four years to work on development of Bioinformatics resources for the analysis and visualization of ribosome profiling data. Ribosome profiling (ribo-seq) is a technology that allows mapping positions of the ribosomes on the whole transcriptome level with a nucleotide precision. The technology allows obtaining high resolution digital snapshots of gene expression in cells. The position is available starting on the 1st of October, 2013.</p>

<p>Candidate:<br />The candidate is expected to have B.S. or M.S. degree in the disciplines such as Computer Science, Statistics, Applied Mathematics, Physics or Electrical Engineering. The candidates with the backgrounds in Life Science disciplines such as Bioinformatics, Computational or Quantitative Biology will also be considered.</p>

<p>Location:<br />The position is available at LAPTI (http://lapti.ucc.ie) that is located in the Western Gate Building (http://www.stwarchitects.com/project-information.php?c=1&amp;p=09993) at University College Cork. Western Gate Building Research Complex hosts several UCC departments and provides ideal environment for interdisciplinary research. Cork (sometimes referenced as “Venice of Ireland”) is the second most populous city in the Republic. It has friendly cosmopolitan atmosphere and vibrant culture. A number of American industrial giants such as Apple , EMC and Pfizer have chosen Cork as a home for their European headquarters.</p>

<p>Application process:<br />The details of the application process are given at http://lapti.ucc.ie/jobs.html. To ensure prompt processing of your application use the subject line: ‘Ph.D. computational’. All applications received prior to August the 1st are guaranteed equal consideration. However, applications at the later dates will also be considered until the position is filled.</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/44669/bioinformatician-at-qub-uk</guid>
  <pubDate>Tue, 01 Oct 2024 21:43:23 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatician at QUB, UK]]></title>
  <description><![CDATA[
<p>The post-holder will work under the direction of the Precision Medicine Centre of Excellence's (PMC) Bioinformatics lead and collaborate closely with the Scientific and Clinical leads. The primary responsibilities will be to develop, validate and maintain data analysis pipelines and algorithms that enable the comprehensive analysis of genomic information derived from cancer specimens, within the context of clinical studies. The PMC is an ISO 15189:2012 accredited medical laboratory (Ref 20634), providing an integrated cancer diagnostic and clinical research service that combines high throughput genomics and digital pathology (www.qub.ac.uk/research-centres/PMC).</p>

<p>About the person:</p>

<p>Essential criteria:</p>

<p>Hold or be about to obtain* a PhD in Computational biology, Bioinformatics, computing science or related subjects. (*must be obtained within 3 months of the closing date for the post) or MSc equivalent with at least 3 years' work experience in a relevant role.<br />Significant relevant research experience in genomics or work experience in a relevant technical/scientific role.<br />Significant experience in managing and analysing NGS data and other big data.<br />Experience in developing and maintaining analysis pipelines.<br />Experience working with Linux/UNIX environments.<br />Proficiency with python, bash, R and/or equivalent languages.<br />To be successful at shortlisting stage, please ensure you clearly evidence in your application how you meet the essential and, where applicable, desirable criteria listed in the Candidate Information document linked on our website.</p>

<p>More at https://hrwebapp.qub.ac.uk/tlive_webrecruitment/wrd/run/ETREC107GF.open</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/44702/postdoc-in-comparative-single-cell-genomics-at-university-of-basel</guid>
  <pubDate>Fri, 06 Dec 2024 23:41:20 -0600</pubDate>
  <link></link>
  <title><![CDATA[Postdoc in Comparative Single Cell Genomics at University of Basel]]></title>
  <description><![CDATA[
<p>A fully funded 4-year Postdoc position is available in the lab of Patrick<br />Tschopp at the University of Basel, Switzerland, study the molecular and<br />tissue-scale dynamics during the embryonic formation of the vertebrate<br />skeleton and compare it across different vertebrate species with distinct<br />habitats.</p>

<p>We are looking for a highly motivated candidate with a PhD degree in<br />Bioinformatics or a related field. Candidates are expected to have a<br />strong background in evolutionary biology and/or comparative functional<br />genomics. Additional experiences in single cell functional genomics<br />analyses, statistics and computational data analyses are a plus, as is<br />an interest in comparative developmental (EvoDevo) questions.</p>

<p>We offer a dynamic and interactive research environment with state-of-the<br />art research facilities, good research funding and internationally<br />competitive salaries.</p>

<p>The Tschopp lab (www.evolution.unibas.ch/tschopp/research/)<br />studies the gene regulatory mechanisms of cell type<br />specification and evolution in vertebrates. See also our<br />preprints at https://doi.org/10.1101/2024.03.26.586769 and<br />https://doi.org/10.1101/2024.11.28.625862 Applications should include<br />a motivation letter, a CV, a list of publications, a statement about<br />research interests, as well as the names and contact details of at<br />least two referees. Applications (in the form of a single .pdf file)<br />should be sent to Patrick Tschopp (patrick.tschopp@unibas.ch); review<br />of applications will begin on January 1st 2025, and will continue until<br />the position is filled.</p>

<p>Patrick Tschopp</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/fun/view/2383/golden-rules-of-bioinformatics</guid>
	<pubDate>Wed, 14 Aug 2013 21:11:33 -0500</pubDate>
	<link>https://bioinformaticsonline.com/fun/view/2383/golden-rules-of-bioinformatics</link>
	<title><![CDATA[Golden Rules of Bioinformatics]]></title>
	<description><![CDATA[<ol>
<li>All constant are variable.</li>
<li>Copy and paste is a genetic error.</li>
<li>First solve the problem, then write the code.</li>
<li>No matter what goes wrong, it will probably look right.</li>
<li>Any simple problem can be insoluble if enough metting are held to discuss it. :P</li>
<li>Stastics is a systematic method of comming to the wrong conclusion with confidence.</li>
<li>Bug is a undocumented feature in programming languages.</li>
<li>Good biological programmer goes on summer holiday with raincoat. [because see 1]</li>
<li>Thanks god Google know python is not a python and multiplication and division are the same thing.</li>
<li>Don' be clever, complex biology will trick you.</li>
</ol>]]></description>
	<dc:creator>Jitendra Narayan</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/2461/taverna-workflow-management-system</guid>
	<pubDate>Thu, 15 Aug 2013 19:34:32 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/2461/taverna-workflow-management-system</link>
	<title><![CDATA[Taverna Workflow Management System]]></title>
	<description><![CDATA[<p>Taverna is an open source domain independent Workflow Management System &ndash; a suite of tools used to design and execute scientific workflows. Taverna has been created by the myGrid project and is funded through a range of organisations and projects.</p>
<p>The Taverna suite is written in Java and includes the Taverna Engine(used for enacting workflows) that powers both the Taverna Workbench(the desktop client application) and the Taverna Server (which allows remote execution of workflows). Taverna is also available as a Command Line Tool for a quick execution of workflows from a terminal.</p><p>Address of the bookmark: <a href="http://www.taverna.org.uk/" rel="nofollow">http://www.taverna.org.uk/</a></p>]]></description>
	<dc:creator>Madhvan Reddy</dc:creator>
</item>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/blog/view/44744/life-as-a-bioinformatician-%E2%80%93-expectation-vs-reality</guid>
	<pubDate>Mon, 23 Dec 2024 19:32:36 -0600</pubDate>
	<link>https://bioinformaticsonline.com/blog/view/44744/life-as-a-bioinformatician-%E2%80%93-expectation-vs-reality</link>
	<title><![CDATA[Life as a Bioinformatician – Expectation vs. Reality]]></title>
	<description><![CDATA[<p>You enter the world of bioinformatics envisioning a sleek, high-tech career, surrounded by cutting-edge algorithms, advanced computational tools, and groundbreaking discoveries. You imagine a seamless integration of biology and data science, where every day you decode the mysteries of life at a molecular level. Your days will be spent analyzing elegant datasets, publishing in top-tier journals, and making significant contributions to human health and the environment. To top it off, you picture yourself working in a comfortable, quiet environment, with plenty of time to perfect your skills and learn new ones.</p><p>While the expectations are not entirely off base, the reality of life as a bioinformatician is a mix of exciting discoveries, troubleshooting, and, let&rsquo;s admit it, a fair amount of frustration. Here&rsquo;s what it&rsquo;s really like:</p><h4>1. <strong>Expectation: Seamlessly Working with Perfect Datasets</strong></h4><p><em>Reality:</em> You often receive messy, incomplete, or poorly annotated datasets. Hours are spent cleaning, normalizing, and validating data before you even begin your analysis. "Garbage in, garbage out" is a constant reminder in your workflow. Tools designed to handle these problems exist, but they require significant customization, which adds another layer of complexity.</p><h4>2. <strong>Expectation: Effortless Multidisciplinary Integration</strong></h4><p><em>Reality:</em> Bridging biology and computational science is far from straightforward. You need to be proficient in both domains while keeping up with advancements in genomics, machine learning, and statistics. Additionally, collaborating with biologists who might not be fluent in computational jargon requires patience and effective communication skills.</p><h4>3. <strong>Expectation: Rapid, Groundbreaking Results</strong></h4><p><em>Reality:</em> Analysis often involves waiting&mdash;waiting for scripts to run, pipelines to complete, or software to install. Bioinformatics projects are iterative; you analyze, debug, and refine repeatedly. A single project might take months to complete due to unforeseen challenges, like computational bottlenecks or the need for additional experiments.</p><h4>4. <strong>Expectation: Beautiful Visualizations with a Click</strong></h4><p><em>Reality:</em> While tools like R, Python, and specialized software can create stunning plots, generating a publication-ready visualization requires significant effort. You&rsquo;ll spend hours tweaking axes, labels, and color palettes, ensuring clarity and accuracy.</p><h4>5. <strong>Expectation: All Work, No Bugs</strong></h4><p><em>Reality:</em> Debugging is an integral part of the job. Whether it&rsquo;s a misconfigured server, a script throwing unexpected errors, or a pipeline breaking due to an update, you&rsquo;ll develop a knack for problem-solving under pressure.</p><h4>6. <strong>Expectation: Ample Time for Skill Development</strong></h4><p><em>Reality:</em> Bioinformatics moves fast. Juggling ongoing projects, tight deadlines, and the constant stream of new tools and algorithms leaves little time for leisurely learning. Staying updated requires proactive effort&mdash;evenings, weekends, or dedicated study breaks.</p><h4>7. <strong>Expectation: Publishing Papers Regularly</strong></h4><p><em>Reality:</em> Publishing in bioinformatics is a marathon, not a sprint. Your analysis needs to be thorough, reproducible, and supported by strong biological insights. Reviewers often demand additional experiments or clarifications, stretching the timeline even further.</p><h4>8. <strong>Expectation: A Clear Career Path</strong></h4><p><em>Reality:</em> Bioinformatics offers diverse career paths, from academia and industry to healthcare and government. However, the choice can be daunting, with each path requiring unique skill sets and presenting different challenges. Navigating these options takes time, research, and sometimes trial and error.</p><h3>Finding Joy in the Chaos</h3><p>Despite these challenges, being a bioinformatician is immensely rewarding. You are at the forefront of science, enabling discoveries that impact medicine, agriculture, and the environment. The thrill of uncovering insights hidden in complex datasets and the satisfaction of solving biological puzzles make the hard work worthwhile.</p><h3>Advice for Aspiring Bioinformaticians</h3><ul>
<li><strong>Embrace Learning:</strong> The field is ever-evolving. Stay curious and adaptable.</li>
<li><strong>Develop Communication Skills:</strong> Bridging the gap between biology and computation is as much about explaining your methods as it is about applying them.</li>
<li><strong>Find a Community:</strong> Collaborate with peers, join forums, and attend conferences to stay inspired and updated.</li>
<li><strong>Celebrate Small Wins:</strong> Every cleaned dataset, successful script, or informative plot is a step forward.</li>
</ul><p>Bioinformatics is a blend of science, technology, and artistry. While the reality might not match the polished expectations, the journey is nothing short of exhilarating. If you&rsquo;re ready to embrace the chaos and keep learning, the field of bioinformatics will never cease to amaze you.</p>]]></description>
	<dc:creator>Abhi</dc:creator>
</item>

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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/2646/bioinformatics-infrastructure-facility-bif-gargi-college-university-of-delhi-traineeship</guid>
  <pubDate>Mon, 19 Aug 2013 18:43:03 -0500</pubDate>
  <link></link>
  <title><![CDATA[Bioinformatics Infrastructure Facility (BIF), Gargi College, University of Delhi @ Traineeship]]></title>
  <description><![CDATA[
<p>Gargi College was established in the year 1967 and is a leading South Campus college of the University of Delhi. It is a college for women and offers education in Arts and Humanities, Commerce, Science and Education.</p>

<p>Gargi believes in its mission statement that every student who passes through the portals of the college emerges as a wholly developed individual symbolizing the spirit of enterprise and inquiry that characterizes Gargi.</p>

<p>Bioinformatics Infrastructure Facility (BIF), Gargi College, University of Delhi invites candidates for filling up the following purely temporary positions sponsored by DBT, New Delhi.</p>

<p>1. Name of the post: Traineeship<br />Essential Qualification: Post Graduate degree in Bioinformatics or any other branch of Life Sciences preferably with dissertation in Bioinformatics.<br />Desirable Qualification: Prior knowledge of programming languages such as C, VB, SQL etc. and software/database development.</p>

<p>2. Name of the post: Research Associate<br />Essential Qualification: PhD in Bioinformatics/Biological Sciences/Computer Science or allied sciences with proven experience in bioinformatics.</p>

<p>3. Name of the post: Studentship<br />Essential Qualifications: Final year Post Graduate students pursuing a degree in Bioinformatics or any branch of Life Science with knowledge of bioinformatics.</p>

<p>How to apply:<br />Interested candidates are required to appear for the walk in interview on 29th Aug, 2013 at 10.00 AM in Principal’s Office, Gargi College, Sirifort Road, N. Delhi-110049, with their CVs, original documents and a set of Photostat copies of all original documents.</p>

<p>http://www.du.ac.in/fileadmin/DU/students/Pdf/du/advt/2013/16082013_Gargi_RAplus2_Advt.pdf</p>
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