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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/26923?offset=450</link>
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	<description><![CDATA[]]></description>
	
	
<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/7218/associate-professor-centre-for-bioinformatics-at-maharshi-dayanand-university-rohtak</guid>
  <pubDate>Thu, 12 Dec 2013 20:49:59 -0600</pubDate>
  <link></link>
  <title><![CDATA[Associate Professor - Centre for Bioinformatics at Maharshi Dayanand University, Rohtak]]></title>
  <description><![CDATA[
<p>ADVERTISEMENT No. PR-54/2013</p>

<p>No. of Posts and Specialization: 1(UR)</p>

<p>Educational Qualification:</p>

<p>(i) Good academic record with a Ph.D. Degree in the concerned /allied /relevant disciplines.</p>

<p>(ii) The Ph.D. Degree shall be a mandatory qualification for all candidates to be appointed as Associate Professor through direct recruitment.</p>

<p>(iii) A Master‟s Degree with at least 55% marks (or an equivalent grade in a point scale wherever grading system is followed).</p>

<p>(iv) A minimum of eight years of experience of teaching and /or research in an academic /research position equivalent to that of Assistant Professor in a University, College or Accredited Research Institution/Industry excluding the period of Ph.D research with evidence of published work and a minimum of 5 publications as books and /or research papers in refereed journals only/policy papers.</p>

<p>(v) Contribution to educations innovation, design of new curricula and courses and technology-mediated teaching learning process with evidence of having guided doctoral candidates and research students.</p>

<p>(vi) A minimum score as stipulated in the Academic Performance Indicator (API) based performance Based Appraisal System (PBAS), set out in this notification in as mentioned in the advertisement.</p>

<p>Send your application to the A.R (Estt.Teaching), M.D.University, Rohtak on or before December 23, 2013.</p>

<p>For more details: http://www.mdurohtak.ac.in/pdf/Notices_Pdf/new_notice/Teaching%20Vacancy%20%28ADVT.%20No.%20PR-54%20of%202013%29.pdf</p>

<p>Last Apply Date: 23 Dec 2013</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/41394/ngsymposium-in-computational-biology</guid>
  <pubDate>Mon, 09 Mar 2020 06:00:30 -0500</pubDate>
  <link></link>
  <title><![CDATA[NGSymposium in Computational Biology]]></title>
  <description><![CDATA[
<p>We have a great pleasure to invite you to the NGSymposium in Computational Biology to celebrate the 5th anniversary of the NGSchool Summer Schools. This international conference will make way for exchanging knowledge and experiences between experienced and early-stage researchers as well as bioinformaticians. The meeting will be held on 31.07 - 1.08.2020 in Warsaw. It will be a satellite event to the #NGSchool2020: Statistical Learning in Genomics. It will cover a wide range of topics from basic and applied biomedical sciences: bioinformatics, genomics, transcriptomics, computational biology, Machine Learning.</p>

<p>Registration of active participants will be open from February, 27 12 PM CET to April 17, 23:59 CET. In registration forms you will be asked for providing us with some basic information about yourself. You will also be able to submit your abstract. You can save your registration form after filling it partially and come back later to supply more data e.g. upload an abstract. Your registration will be completed only with the payment of the registration fee reaching our accounts - please make sure to transfer the money in advance!</p>

<p>Registration of passive participants will be open after closing of registration of active participants.</p>

<p>Details an registration: https://ngschool.eu/conference/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/5888/nit-calicut-faculty-jobs-2013-in-bioinformatics</guid>
  <pubDate>Thu, 24 Oct 2013 13:00:37 -0500</pubDate>
  <link></link>
  <title><![CDATA[NIT Calicut Faculty Jobs 2013 in Bioinformatics]]></title>
  <description><![CDATA[
<p>NATIONAL INSTITUTE OF TECHNOLOGY CALICUT, KERALA</p>

<p>NOTIFICATION FOR FACULTY RECRUITMENT – 2013</p>

<p>(Faculty openings in Technology, Science, Architecture and Management at NIT Calicut, Kerala)</p>

<p>National Institute of Technology Calicut, Kerala, established under Act XXIX/ 2007of the Parliament is one of the leading technological institutions in the Country with nearly 6000 students enrolled for various UG, PG and Ph.D. programmes in Technology, Science, Architecture and Management. The Institute invites applications from Indian nationals, possessing consistent excellent academic record, commitment to quality teaching and potential for carrying out outstanding research, for the post of Assistant Professors in various departments against the backlog reserved vacancies for Scheduled Caste (SC), Scheduled Tribe (ST), Other Backward Communities (OBC) and Persons with Disabilities (PWDs) and also under open merit quota as detailed below. Candidates belonging to SC, ST and OBC desirous of considering for selection under UR category also shall specifically indicate so in column 4.</p>

<p>Reservation quota for PWDs will be counted against the respective community. Young, meritorious, dynamic and student friendly academicians are welcome to join hands with the existing team in their effort to transform this Institute to a world class educational institution.</p>

<p>Candidates possessing Ph.D. degree will be considered for appointment on contract basis initially.</p>

<p>They will be considered for movement to AGP `7000 after one year of satisfactory performance.</p>

<p>Meritorious candidates possessing M.Tech./M.Phil. (*) with remarkably good potential to carry out outstanding research and already pursuing Ph.D. or aspiring to pursue Ph.D. will also be considered for appointment on contract, initially for a period of 3 years, extendable for a further period of 2 years on a year to year basis or till the candidate acquires Ph.D. degree whichever is earlier. Renewal of contract<br />will be done on an annual basis, subject to satisfactory progress of Ph.D. work, good conduct and good performance in teaching. Faculty appointed on contract basis will not be treated as regular staff till they are regularized, subject to the conditions stated earlier. The Institute has adopted 4-tier flexible faculty structure recommended by MHRD. </p>

<p>More Info : http://www.nitc.ac.in/index.php/?url=content/submenu/2345/5</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/5958/srfjrf-national-institute-of-immunology</guid>
  <pubDate>Wed, 30 Oct 2013 06:45:57 -0500</pubDate>
  <link></link>
  <title><![CDATA[SRF/JRF @ National Institute of Immunology]]></title>
  <description><![CDATA[
<p>ADVERTISEMENT OF WALK-IN-INTERVIEW</p>

<p>NAME OF THE POST : SRF/JRF (Four Posts only)</p>

<p>DURATION : Indicated with the respective project mentioned below:</p>

<p>NAME OF THE PROJECT : As Mentioned below:</p>

<p>1. Serological diversity and molecular characterization of Dichelobector nodusus and development of vaccine against virulent footroot funded by NAIP. (Tenable upto 31.03.2014)</p>

<p>2. Development of oral vaccine against Clostridium perfringenes employing translational fusion of immunodominant epitopes of beta toxin with heat labile entertoxin B funded by DBT. (Tenable upto 25.02.2014)</p>

<p>3. Indo-Norwegian project, “Evaluation of major porins, ompC and ompR of Areomonas hydrophila as potential vaccine candidates and identification and characterization of immune genes of Indian major carp, Labeo rohita” (Tenable upto 31.03.2014)</p>

<p>EDUCATIONAL QUALIFICATIONS: For JRF- M.Sc/M.Tech in any subject of Biological  Sciences/Life Sciences</p>

<p>For SRF- M.Sc/M.Tech in any subject of Biological Sciences/Life Sciences with 2 years of Research Experience.</p>

<p>JOB DESCRIPTION : The Candidate should have experience in gene Expression, protein purification, molecular biology techniques and bioinformatics<br />EMOLUMENTS : SRF: Rs. 18,000/- per month consolidated plus 30% HRA if /NET/GATE qualified otherwise Rs. 14,000/- per month consolidated + 30% HRA.</p>

<p>JRF: Rs. 16,000/- per month consolidated + 30% HRA if NET/GATE qualified otherwise Rs. 12,000/- per month consolidated + 30% HRA</p>

<p>SCIENTIST NAME : Dr. Lalit C. Garg, SS-VII (Gene Regulation Lab)</p>

<p>SCIENTIST’S EMAIL : lalit@nii.ac.in</p>

<p>WALK IN INTERVIEW ON : October 31st, 2013</p>

<p>REGISTRATION OF CANDIDATES: 10.30 AM to 11.00 AM </p>

<p>Advertisement: http://www1.nii.res.in/sites/default/files/project-Dr.Lalit-31oct2013.pdf</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/6104/incob-2014</guid>
  <pubDate>Thu, 07 Nov 2013 17:53:36 -0600</pubDate>
  <link></link>
  <title><![CDATA[InCoB 2014]]></title>
  <description><![CDATA[
<p>The 13th International Conference on Bioinformatics (InCoB 2014) will be held in Novotel Sydney Brighton Beach, Sydney, New South Wales, Australia. This year, the InCoB will be held earlier from 31st July to 2nd August 2014 to run back-to-back with the International Biophysics Congress 2014 at the Brisbane Convention and Exhibition Centre, Queensland (3-7 Aug).</p>

<p>More at http://incob2014.org/</p>
]]></description>
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<item>
	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/6380/hidden-markov-models-viterbi-algorithm-markov-chain-exploration-with-script</guid>
	<pubDate>Thu, 14 Nov 2013 13:36:56 -0600</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/6380/hidden-markov-models-viterbi-algorithm-markov-chain-exploration-with-script</link>
	<title><![CDATA[Hidden Markov Models, Viterbi Algorithm, Markov Chain Exploration with script]]></title>
	<description><![CDATA[<p><strong>Hidden Markov Models, the Viterbi Algorithm, and CpG Islands (in VB6)</strong></p><p><strong>Problem :</strong></p><p>The CG island is a stretch of DNA (usually longer than 200 bases) in which the frequency of the CG sequence is higher than other regions. It is also called the CpG island, where "p" simply indicates that "C" and "G" are connected by a phosphodiester bond.<br /><br />CpG islands are often located around the promoters of housekeeping genes (which are essential for general cell functions) or other genes frequently expressed in a cell. At these locations, the CG sequence is not methylated. By contrast, the CG sequences in inactive genes are usually methylated to suppress their expression. The methylated cytosine may be converted to thymine by accidental deamination. Unlike the cytosine to uracil mutation which is efficiently repaired, the cytosine to thymine mutation can be corrected only by the mismatch repair which is very inefficient. Hence, over evolutionary time scales, the methylated CG sequence will be converted to the TG sequence.</p><p>Find step wise explanationand implementation steps at <a href="http://dna.cs.byu.edu/bio465/Labs/hmm.shtml">http://dna.cs.byu.edu/bio465/Labs/hmm.shtml</a></p><p>Source code with explanation <a href="http://www.tannerhelland.com/1187/hidden-markov-models-viterbi-algorithm-cpg-islands-in-vb6/">http://www.tannerhelland.com/1187/hidden-markov-models-viterbi-algorithm-cpg-islands-in-vb6/</a></p><p>Fore detail understanding of HMM read this excellent tutorial <a href="http://www.cs.ubc.ca/~murphyk/Software/HMM/labman2.pdf">http://www.cs.ubc.ca/~murphyk/Software/HMM/labman2.pdf</a></p><p>Viterbi Algo at <a href="http://en.wikipedia.org/wiki/Viterbi_path">http://en.wikipedia.org/wiki/Viterbi_path</a></p><p>For firther reading Wiki page <a href="http://en.wikipedia.org/wiki/Hidden_Markov_model">http://en.wikipedia.org/wiki/Hidden_Markov_model</a></p><p>On CpG island paper and for indepth understanding <a href="http://www.biomedcentral.com/1471-2164/12/S2/S10">http://www.biomedcentral.com/1471-2164/12/S2/S10</a></p><p>&nbsp;</p><p>If you are more interested in exploring&nbsp;Markov Chain Exploration and understand it with graphical version please visit <a href="http://www.planet-source-code.com/vb/scripts/ShowCode.asp?txtCodeId=75049&amp;lngWId=1">http://www.planet-source-code.com/vb/scripts/ShowCode.asp?txtCodeId=75049&amp;lngWId=1</a></p><p>Reference:</p><p>1.<a href="http://www.planet-source-code.com/vb/scripts/ShowCode.asp?txtCodeId=75049&amp;lngWId=1">http://www.planet-source-code.com</a></p><p>2. <a href="http://www.tannerhelland.com/1187/hidden-markov-models-viterbi-algorithm-cpg-islands-in-vb6/">http://www.tannerhelland.com</a></p>]]></description>
	<dc:creator>Manisha Mishra</dc:creator>
</item>

<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/6562/molecular-bioinformatics-lab-mbl</guid>
  <pubDate>Tue, 19 Nov 2013 18:23:27 -0600</pubDate>
  <link></link>
  <title><![CDATA[Molecular Bioinformatics Lab (MBL)]]></title>
  <description><![CDATA[
<p>The main subject of interest in our laboratory is the study of the relationship among sequence, structure, and function in proteins and nucleic acids. Our research can be divided in two major topics:</p>

<p>the study of the sequence-structure relationship<br />(application -&gt; structure prediction)<br />the study of the structure-function relationship<br />(application -&gt; function prediction)</p>

<p>Therefore, anything related to the configuration (sequence) and conformation (structure) in atomic systems of proteins and nucleic acids, and the interaction of these with other elements (function) is of our major interest.</p>

<p>Lab page @ http://melolab.org/mbl/</p>
]]></description>
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<item>
  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/6818/scientist-positions-gujarat-state-biotechnology-mission</guid>
  <pubDate>Mon, 25 Nov 2013 10:26:39 -0600</pubDate>
  <link></link>
  <title><![CDATA[Scientist Positions @ Gujarat State Biotechnology Mission]]></title>
  <description><![CDATA[
<p>Gujarat State Biotechnology Mission invite applications [Online Only] under various projects* namely Gujarat Biodiversity Gene Bank (BioGene), Gujarat Institute of Genomics (GIG), Gujarat Institute of Bioinformatics [GIBS] and Gujarat Institute of Marine Biotechnology. Eligible candidates can Apply through online application portal.</p>

<p>1 Scientist E 3</p>

<p>50,000/-</p>

<p>M.Sc. in Life sciences or Plant Sciences or Biotechnology or Microbiology or Bioinformatics or Ph.D. from a recognized university in any of above subject.</p>

<p>Minimum 8 Yrs. of experience after M.Sc. or 5 Yrs. of experience after Ph.D. in responsible position of work in R &amp; D in the area of genomics/ conservation biotechnology/bioinformatics/Planning/Scientific Administration in Science and technology organization. Highly qualified in the area of modern biology, as evidenced through research experience and proven ability to carry out work in the area of conservation biotechnology. Age limit not exceeding 40yrs.</p>

<p>2 Scientist B 6</p>

<p>30,000/-</p>

<p>M.Sc. in Life sciences or Plant Sciences or Biotechnology or Microbiology or Bioinformatics or Ph.D. from a recognized university in any of above subject shall be preferred.</p>

<p>Minimum 3 Yrs. of experience after M.Sc. in responsible position of work in R &amp; D in the area of genomics/ conservation biotechnology/ bioinformatics /Planning/Scientific Administration in Science and technology organization. Highly qualified in the area of modern biology, as evidenced through research experience and proven ability to carry out work in the area of conservation biotechnology. Age limit not exceeding 35yrs.</p>

<p>The positions are purely on contractual basis for 11 months. Interested candidates can apply online in specified format available at "http://leogen.in/recruit/" The last date of applying is 24th December, 2013. Applications must be submitted online only. Applications submitted in any other format except online prescribed performa will be rejected. Candidates in service must apply through proper channel. Candidates will be required to provide original documents along with duly filled and signed application Performa, as and when called for interview.</p>

<p>For more details please visit the website URL : http://leogen.in/recruit</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/7088/gabi</guid>
  <pubDate>Fri, 06 Dec 2013 16:43:01 -0600</pubDate>
  <link></link>
  <title><![CDATA[GABi]]></title>
  <description><![CDATA[
<p>GABi Research<br />The major researching fields defined as the GABi scope are described next:<br />    Sequence Analysis<br />    Protein Structure Prediction<br />    Comparative Genomics<br />    Functional Analysis of Residues on Protein Families<br />    Gene/Protein Networks<br />    Genome structure &amp; base composition<br />    Highthroughput data analysis from NGS</p>

<p>Lab Page http://gabi.cidbio.org/index/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/7214/lapti-lab</guid>
  <pubDate>Thu, 12 Dec 2013 18:19:12 -0600</pubDate>
  <link></link>
  <title><![CDATA[LAPTI Lab]]></title>
  <description><![CDATA[
<p>The main theme of our research is the understanding of how genetic information is decoded from DNA into RNA and proteins. Someone may find this topic a little strange and argue that we already know how this is happening.</p>

<p>Translational recoding. </p>

<p>RNA editing. </p>

<p>Evolution of the genetic code and translation.</p>

<p>More at http://lapti.ucc.ie/research.html</p>

<p>Lab page http://lapti.ucc.ie/index.html</p>
]]></description>
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