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	<title><![CDATA[BOL: Related items]]></title>
	<link>https://bioinformaticsonline.com/related/26927?offset=950</link>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/42809/bioinformatics-in-africa-part2-kenya</guid>
	<pubDate>Sat, 06 Feb 2021 13:23:54 -0600</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/42809/bioinformatics-in-africa-part2-kenya</link>
	<title><![CDATA[Bioinformatics in Africa: Part2 - Kenya]]></title>
	<description><![CDATA[<p>International Livestock Research Institute (ILRI):</p><p>Under&nbsp; &nbsp;a&nbsp; &nbsp;NEPAD&nbsp; &nbsp;initiative,&nbsp; &nbsp;the&nbsp; &nbsp;Biosciences&nbsp; &nbsp;Eastern&nbsp; &nbsp;and&nbsp; &nbsp;Central&nbsp; &nbsp;Africa&nbsp; &nbsp;(BECA)&nbsp; (www.biosciencesafrica.org) was established at ILRI. BECA consists of a hub, regional nodes, and&nbsp; other affiliated laboratories and partner institutes. A state of the art joint Bioinformatics Platform&nbsp; (www.becabioinfo.org), whose overall goal is to provide a coherent and powerful bioinformatics&nbsp; infrastructure for use by all scientists in East and central Africa. The Platform goal requires both&nbsp; physical and intellectual developments that together provide researchers with access to diverse&nbsp; infrastructure in a wide&shy;area network, thereby addressing four important aspects of bioinformatics:&nbsp;</p><p>1) Science: bioinformatics tools for data integration and visualization, standardization of data&nbsp; formats and data analysis strategies, and distribution of analysis tasks over local&shy; and widearea networks are in development;&nbsp;</p><p>2)&nbsp; Bioinformatics Support Facility: provides assistance and custom programming to projects&nbsp; and those unable to establish a bioinformatics support function intrinsic to their project due&nbsp; to shortage of qualified personnel or lack of funding;&nbsp;</p><p>3) Hardware Platform: provide a powerful high performance computing platform capable of&nbsp; handling the largest analysis needs for projects;&nbsp;</p><p>4) Bioinformatics Training for East and central African scientists: While many Web&shy;based&nbsp; tools are available to the wet&shy;lab researcher, the Web is not well suited for tasks beyond&nbsp; single&shy;sequence annotation. Researchers need to become productive in a server&shy;based Unix&nbsp; environment with its wealth of scripting and automation tools. Even at an entry&shy;level, this&nbsp; can be an intimidating task if proper guidance is not available.</p><p>International&nbsp;Centre&nbsp;of&nbsp;Insect&nbsp;Physiology&nbsp;and&nbsp;Ecology&nbsp;(ICIPE): ICIPE&rsquo;s&nbsp;research&nbsp;focus&nbsp;is&nbsp;on&nbsp;insect&nbsp;biology,&nbsp;in&nbsp;order&nbsp;to&nbsp;improve&nbsp;the&nbsp;wellbeing&nbsp;of&nbsp;the&nbsp;peoples&nbsp;of&nbsp;the&nbsp; tropics&nbsp;through&nbsp;insect&nbsp;science.&nbsp;There&nbsp;is&nbsp;a&nbsp;commitment&nbsp;to&nbsp;utilise&nbsp;contemporary&nbsp;science&nbsp;in&nbsp;order&nbsp;to&nbsp; limit&nbsp;the&nbsp;impact&nbsp;of&nbsp;disease&nbsp;vectors,&nbsp;and&nbsp;agricultural&nbsp;pests.&nbsp;The&nbsp;understanding&nbsp;of&nbsp;the&nbsp;mechanisms&nbsp; associated&nbsp;with&nbsp;behaviour&nbsp;(e.g.&nbsp;attraction&nbsp;and&nbsp;repellency)&nbsp;is&nbsp;crucial.&nbsp;ICIPE&nbsp;seeks&nbsp;to&nbsp;enhance&nbsp;its&nbsp; bioinformatics&nbsp;capacity&nbsp;in&nbsp;order&nbsp;to&nbsp;support&nbsp;data&nbsp;from&nbsp;various&nbsp;EST&nbsp;projects&nbsp;designed&nbsp;to&nbsp;gain&nbsp;insights&nbsp; into&nbsp;the&nbsp;insect&nbsp;ecology&nbsp;and&nbsp;plant&nbsp;pathogen&nbsp;interactions&nbsp;though&nbsp;studies&nbsp;of&nbsp;metabolic&nbsp;pathways&nbsp; associated&nbsp;with&nbsp;production&nbsp;of&nbsp;all&nbsp;elochemicals.&nbsp;</p><p>Long&shy;term training activities:</p><p>Kenyatta University: An introductory course in Bioinformatics is offers to MSc Biotechnology&nbsp; students. This comprises of 35 hours of lectures and practicals.</p><p>University of Nairobi: A centre for Biotechnology and Bioinformatics (CEBIB), which will offer&nbsp; postgraduate training (diplomas, MSc and PhD) in areas of biotechnology and bioinformatics has&nbsp; recently been launched. Other universities in Kenya, including Egerton, Maseno and the Jomo Kenyatta University of&nbsp; Agriculture and Technology offer introductory courses to undergraduates in biomedical sciences. In addition, under the BECA platform MSc and PhD fellowships are being made available for&nbsp; Bioinformatics students. ILRI is forging links with Universities in South Africa and the United&nbsp; Kingdom to provide access to courses and training material.&nbsp;</p><p>Research Interest and Activities:</p><p>The following are the present areas of research interest: 1. EST clustering 2. Genome sequencing and annotation 3. Functional genomics and proteomics (including key tropical pathogens) 4. Structural bioinformatics 5. Development of Bioinformatics Data Management Systems 6. Gene Mining 7. High Throughput Genotyping 8. Microarray data management and analysis 9. Metagenomics 10. Immunoinformatics 11. Host&shy;pathogen interaction 12. High performance computing and grid development 13. Parasite transfection technologies 14. Cell cycle regulation 15. Population genetics 16. Vector genomics 17. Drug, vaccine and diagnostic target discovery</p><p>More at&nbsp;Web&nbsp;site&nbsp;and&nbsp;links:</p><p>http://www.ilri.cgiar.org/</p><p>http://www.icipe.org/ &nbsp; &nbsp;</p><p>http://www.uonbi.ac.ke/cebib</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/pages/view/42815/bioinformatics-in-africa-part7-tunisia</guid>
	<pubDate>Sat, 06 Feb 2021 21:25:09 -0600</pubDate>
	<link>https://bioinformaticsonline.com/pages/view/42815/bioinformatics-in-africa-part7-tunisia</link>
	<title><![CDATA[Bioinformatics in Africa: Part7 - Tunisia]]></title>
	<description><![CDATA[<p>Institut Pasteur de Tunis (IPT):<br />The IPT is a research institution founded in 1883. IPT is under the supervision of the Ministry of &nbsp;Health and is part of the Universit&eacute; El Manar of Tunis (Ministry of high Education). The missions &nbsp;of the institute are: Public Health Laboratory activities (PHL), Research on infectious diseases, and &nbsp;R/D on vaccines. Research programs are mainly oriented towards local health problems such as &nbsp;leishmaniais, viral hepatitis, and scorpion venoms. The &nbsp; group &nbsp; of &nbsp; Bioinformatics &nbsp; and &nbsp; Modelling &nbsp; of &nbsp; the &nbsp; IPT &nbsp; is &nbsp; hosted &nbsp; by &nbsp; the &nbsp;Laboratoire &nbsp;d&rsquo;Immunopathologie Vaccinologie et G&eacute;n&eacute;tique Mol&eacute;culaire &nbsp;(LIVGM), and exists since the &nbsp;beginning of 2005. Its present research activities include: genome annotation, EST clustering and &nbsp;modelling of the host/parasite response to Leishmania infection. It consists of two senior scientists, &nbsp;two PhD students and one MSc student</p><p>Centre&nbsp;de&nbsp;Biotechnology&nbsp;de&nbsp;Sfax&nbsp;(CBS):<br />Bioinformatics&nbsp;activity&nbsp;started&nbsp;at&nbsp;CBS&nbsp;in&nbsp;2001&nbsp;with&nbsp;the&nbsp;setting&shy;up&nbsp;of&nbsp;a&nbsp;research&nbsp;and&nbsp;service&nbsp;unit&nbsp;of&nbsp; bioinformatics.&nbsp;This&nbsp;unit&nbsp;currently&nbsp;includes&nbsp;one&nbsp;senior&nbsp;researcher,&nbsp;one&nbsp;engineer&nbsp;and&nbsp;four&nbsp;Phd&nbsp; students.&nbsp;Activities&nbsp;include&nbsp;sequence&nbsp;annotation&nbsp;(service)&nbsp;and&nbsp;three&nbsp;research&nbsp;programs:&nbsp;ab&nbsp;initio&nbsp; prediction&nbsp;of&nbsp;short&nbsp;eukaryote&nbsp;genes,&nbsp;statistical&nbsp;modelling&nbsp;by&nbsp;Bayesian&nbsp;networks&nbsp;approach&nbsp;of&nbsp;signal&nbsp; transduction&nbsp;pathways&nbsp;and&nbsp;statistical&nbsp;analysis&nbsp;of&nbsp;human&nbsp;sequence&nbsp;variation&nbsp;data&nbsp;(haplotype&nbsp; reconstruction&nbsp;and&nbsp;linkage&nbsp;disequilibrium).&nbsp;Activities&nbsp;of&nbsp;the&nbsp;Bioinformatics&nbsp;unit&nbsp;could&nbsp;be&nbsp;found&nbsp;at&nbsp; the&nbsp;website:&nbsp;http://www.cbs.rnrt.tn/&nbsp;and&nbsp;the&nbsp;research&nbsp;activity&nbsp;report&nbsp;is&nbsp;available&nbsp;under&nbsp;request&nbsp;to&nbsp; Bioinformatics@cbs.rnrt.tn.&nbsp;Although&nbsp;the&nbsp;computing&nbsp;facilities&nbsp;are&nbsp;good,&nbsp;there&nbsp;is&nbsp;still&nbsp;a&nbsp;need&nbsp;for&nbsp; trained&nbsp;human&nbsp;resources&nbsp;to&nbsp;strengthen&nbsp;bioinformatics&nbsp;capacities&nbsp;at&nbsp;CBS,&nbsp;particularly&nbsp;in&nbsp;structural&nbsp; bioinformatics.</p><p>Web site and links: http://www.cbs.rnrt.tn</p>]]></description>
	<dc:creator>BioStar</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4706/junior-research-fellow-iit</guid>
  <pubDate>Sat, 21 Sep 2013 18:04:50 -0500</pubDate>
  <link></link>
  <title><![CDATA[Junior Research Fellow @ IIT]]></title>
  <description><![CDATA[
<p>Applications are invited from the citizens of India for filling up the following temporary position for the sponsored project undertaken in the Department of Biosciences and Bioengineering of this Institute. The position is temporary initially for a period of  1 Year  and tenable only for the duration of the project. The requisite qualification &amp; experience etc. are given below:<br /> <br />Project Code, Project Title &amp; Funding Agency<br />13DST016 : "Studies on the component of mimivirus DNA replication machinery" (Department of Science &amp; Technology)<br /> <br />Position &amp; Salary	<br />Junior Research Fellow (1 Post )<br />Consolidated salary <br /> Rs.16000/- p.m. + HRA<br />Qualification	<br />MSc or MTech or BTech or BE in one of the following branches with first class-Biochemistry, Microbiology, genetic Engineering, Biotechnology, Medical Microbiology, Bioinformatics, life sciences etc.<br />Job Profile	<br />Project involves virus culturing and purification, cloning, protein purification and measurement of helicase, primase, nuclease, translocase activities using various methods. Person should be highly motivated and some experience in cloning and protein purification is desirable. Experience in handling insect cell lines will be an added advantage.</p>

<p>More at http://www.ircc.iitb.ac.in/IRCC-Webpage/rnd/RecruitmentGenerateCircular.jsp?srno=2013086</p>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/43418/caceres-lab</guid>
  <pubDate>Sat, 02 Oct 2021 00:20:42 -0500</pubDate>
  <link></link>
  <title><![CDATA[Cáceres Lab]]></title>
  <description><![CDATA[
<p>Lab are included within the Genomics, Bioinformatics and Evolution group of the UAB, and collaborate closely with other researchers in the Barcelona area, such as Xavier Estivill of the Centre for Genomic Regulation (CRG), Juan R González of the Centre for Research in Environmental Epidemiology (CREAL), and Tomàs Marqués-Bonet of the Institute of Evolutionary Biology (IBE), as well as with other international groups and projects.</p>

<p>https://grupsderecerca.uab.cat/cacereslab/</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/videolist/watch/5462/showreel-2008-cortical-studios</guid>
	<pubDate>Sat, 12 Oct 2013 18:33:40 -0500</pubDate>
	<link>https://bioinformaticsonline.com/videolist/watch/5462/showreel-2008-cortical-studios</link>
	<title><![CDATA[Showreel 2008 - Cortical Studios]]></title>
	<description><![CDATA[<iframe width="" height="" src="https://www.youtube-nocookie.com/embed/qrReqMKe7Xg" frameborder="0" allowfullscreen></iframe>We are a bioinformatics company that combines 3D animation, multimedia and scientific knowledge to meet your communication needs. With our academic background in the fields of biotechnology and molecular cellbiology and our computer expertise we provide cutting edge 3D animation productions for even the most complex projects. We translate complex scientific information into comprehensible artistic imagery in order to improve communication in the life sciences. Please feel free to contact us with any questions regarding the possibilities for your unique project.

Cortical Studios
Keizersgracht 8
1015 CN
Amsterdam
The Netherlands
info@corticalstudios.nl
www.corticalstudios.nl]]></description>
	
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/43943/bioinformatics-tutorial</guid>
	<pubDate>Mon, 22 Aug 2022 23:56:22 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/43943/bioinformatics-tutorial</link>
	<title><![CDATA[Bioinformatics Tutorial !]]></title>
	<description><![CDATA[<p>This site aims to be a useful resource for bioinformatics beginners. Feel free to jump right in with the section most relevant to you, and if you're not sure, then the place to start is definitely Unix <p>Address of the bookmark: <a href="https://astrobiomike.github.io/" rel="nofollow">https://astrobiomike.github.io/</a></p>]]></description>
	<dc:creator>Neel</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/researchlabs/view/44226/rotifers-lab</guid>
  <pubDate>Wed, 08 Mar 2023 23:23:14 -0600</pubDate>
  <link></link>
  <title><![CDATA[Rotifers Lab]]></title>
  <description><![CDATA[
<p>For scientists in the MBL’s Gribble Lab, the rotifer (Brachionus manjavacas) is used as a model organism to study evolution, stress responses, the biology of aging, and maternal effects. Rotifers are small, easy to grow in the lab, have a short lifespan, and share many of their genes with humans. That makes them ideal specimens in which to address questions relevant to human health as well as understand basic biological and evolutionary processes. Brachionus rotifers produces eggs that can be completely dried and frozen for decades, then hatch within a day when exposed to water and light.</p>

<p>https://www.mbl.edu/research/research-organisms/rotifer<br />https://gribblebiolab.org/</p>
]]></description>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/4947/experimental-scientific-officer-bioinformatics</guid>
  <pubDate>Fri, 27 Sep 2013 11:09:44 -0500</pubDate>
  <link></link>
  <title><![CDATA[Experimental Scientific Officer (Bioinformatics)]]></title>
  <description><![CDATA[
<p>Closing Date:  8 October 2013</p>

<p>Salary:   £27,854 - £29,541, with progression to £36,298</p>

<p>You will perform cutting edge computational biology within the Faculty of Medical Sciences, with a particular focus on the Northern Institute for Cancer Research (NICR), and contribute to the delivery of Faculty wide programmes of training, analytical services and skill transfer between Faculty Institutes.</p>

<p>You will have a relevant first degree or equivalent qualifications and/or experience in a relevant scientific/technical role, together with previous specialist experience at a senior level in bioinformatics. A PhD is desirable.</p>

<p>This position is part of the Bioinformatics Support Unit but physically located for the majority of the time in the NICR buildings.</p>

<p>Tenable for three years.</p>

<p>Informal enquiries to unit head Dr Simon Cockell: 0191 222 7253; simon.cockell@ncl.ac.uk</p>

<p>For more information visit @ https://www15.i-grasp.com/fe/tpl_newcastle02.asp?s=4A515F4E5A565B1A&amp;jobid=50667,2552984041&amp;key=70203469&amp;c=725434237887&amp;pagestamp=sepghtjhowdqpsxuyn</p>

<p>You can also find several other jobs @http://bsu.ncl.ac.uk/support/recruitment/</p>
]]></description>
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	<guid isPermaLink="true">https://bioinformaticsonline.com/bookmarks/view/44518/virus-bioinformatics-tools</guid>
	<pubDate>Wed, 24 Apr 2024 06:19:55 -0500</pubDate>
	<link>https://bioinformaticsonline.com/bookmarks/view/44518/virus-bioinformatics-tools</link>
	<title><![CDATA[Virus Bioinformatics Tools]]></title>
	<description><![CDATA[<p><span>Bioinformatics tools play a crucial role in studying viruses, enabling researchers to analyze their genetic makeup, structure, function, and evolution. Here are some commonly used bioinformatics tools for virus research</span></p>
<p>https://evirusbioinfc.notion.site/18e21bc49827484b8a2f84463cb40b8d?v=92e7eb6703be4720abf17a901bc9a947</p><p>Address of the bookmark: <a href="https://evirusbioinfc.notion.site/18e21bc49827484b8a2f84463cb40b8d?v=92e7eb6703be4720abf17a901bc9a947" rel="nofollow">https://evirusbioinfc.notion.site/18e21bc49827484b8a2f84463cb40b8d?v=92e7eb6703be4720abf17a901bc9a947</a></p>]]></description>
	<dc:creator>LEGE</dc:creator>
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  <guid isPermaLink='true'>https://bioinformaticsonline.com/opportunity/view/44727/postdoctoral-scholar-in-bacterial-evolution-at-pathogen-and-microbiome-institute-at-northern-arizona-university</guid>
  <pubDate>Fri, 13 Dec 2024 12:49:16 -0600</pubDate>
  <link></link>
  <title><![CDATA[Postdoctoral Scholar in Bacterial Evolution at Pathogen and Microbiome Institute at Northern Arizona University]]></title>
  <description><![CDATA[
<p>We are pleased to announce a Postdoctoral Scholar position to study<br />bacterial evolution at the Pathogen and Microbiome Institute at<br />Northern Arizona University with Professor Paul Keim. The scholar<br />will have the opportunity also work with Professor Sam Sheppard at<br />The University of Oxford on joint projects. See our recent paper<br />on interspecific gene flow in Campylobacter. (DOI:<br />https://doi.org/10.1128/mbio.00581-24)</p>

<p>The job description: "This research position focuses on the science<br />of bacterial evolution. It will consist of researching theoretical<br />principles, but could include translational applications. Phylogenomic<br />and bioinformatic analysis of bacterial populations in nature or<br />in laboratory experiments will be a key component of the work. Prior<br />experience is an asset though training will be possible at PMI.<br />Likewise, laboratory microbiological, molecular, and biochemical<br />skills are an asset though not essential. Communication and critical<br />thinking skills are essential for performing the work and for<br />communicating to the local and international scientific communities.<br />Participating in team or independent grant writing to obtain research<br />funding will be required. Student mentoring is a part of the NAU<br />mission and is a partial expectation."</p>

<p>https://hr.peoplesoft.nau.edu/psp/ph92prta/EMPLOYEE/HRMS/c/HRS_HRAM.HRS_APP_SCHJOB.GBL?Page=HRS_APP_JBPST&amp;Action=U&amp;FOCUS=Applicant&amp;SiteId=1&amp;JobOpeningId=608024&amp;PostingSeq=1</p>

<p>Northern Arizona University is located in Flagstaff, Arizona, a<br />beautiful mountain town with a surprisingly vibrant restaurant<br />scene. Located a little over an hour from the Grand Canyon and ~45<br />min from Sedona, Flagstaff is a hiker's paradise. In fact, the city<br />of Flagstaff operates more than 50 miles of unpaved trails and there<br />are, on average, 266 sunny days per year with which to enjoy them.<br />At 7000 ft in elevation, Flagstaff experiences all four seasons,<br />but thesummers are mild and, in the winter, you can be on the ski<br />slopes within 30 min! https://www.flagstaffarizona.org/</p>

<p>As mentioned, joint projects with Professor Sheppard at Oxford<br />University are possible, including travel to his laboratory in the<br />United Kingdom. https://www.biology.ox.ac.uk/people/samuel-sheppard</p>

<p>Contact Information:<br />Paul.Keim@nau.edu</p>

<p>Paul S. Keim, Ph.D.<br />Regents Professor, &amp;<br />Cowden Endowed Chair of Microbiology<br />Northern Arizona University<br />Flagstaff, AZ 86011-4073</p>

<p>Paul S Keim</p>
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